BLASTX nr result
ID: Cephaelis21_contig00025104
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00025104 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi... 107 8e-22 gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thal... 103 1e-20 ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar... 103 1e-20 ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l... 101 6e-20 ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi... 101 7e-20 >ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Cucumis sativus] gi|449518241|ref|XP_004166151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Cucumis sativus] Length = 445 Score = 107 bits (268), Expect = 8e-22 Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 3/82 (3%) Frame = +3 Query: 3 YRDVEKVNLGLRKATEFFYWVESHFGFTHNEATCKEMALVFAKGNSLKSLWGFLKEMSRK 182 +RD K LGL KA EFFYWVE+HFGF H+E TC+EMA V A+GN+L LW FLKEMSR+ Sbjct: 104 HRDPFKAKLGLNKALEFFYWVETHFGFQHDEITCREMACVLARGNTLMGLWDFLKEMSRR 163 Query: 183 R---IVNTAIVTRVIKVLGEEG 239 +V TA +T +IKVLGEEG Sbjct: 164 ENGGLVTTATITCLIKVLGEEG 185 >gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thaliana] Length = 410 Score = 103 bits (257), Expect = 1e-20 Identities = 46/83 (55%), Positives = 63/83 (75%), Gaps = 4/83 (4%) Frame = +3 Query: 3 YRDVEKVNLGLRKATEFFYWVESHFGFTHNEATCKEMALVFAKGNSLKSLWGFLKEMSR- 179 Y D +KV++GL+KA EFF+W+E+HFGF HNE TC++MA + AKGN K LW FL+++SR Sbjct: 97 YMDPKKVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRR 156 Query: 180 ---KRIVNTAIVTRVIKVLGEEG 239 K +V TA +T ++K LGEEG Sbjct: 157 ENGKNVVTTASITCLMKCLGEEG 179 >ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332197853|gb|AEE35974.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 458 Score = 103 bits (257), Expect = 1e-20 Identities = 46/83 (55%), Positives = 63/83 (75%), Gaps = 4/83 (4%) Frame = +3 Query: 3 YRDVEKVNLGLRKATEFFYWVESHFGFTHNEATCKEMALVFAKGNSLKSLWGFLKEMSR- 179 Y D +KV++GL+KA EFF+W+E+HFGF HNE TC++MA + AKGN K LW FL+++SR Sbjct: 97 YMDPKKVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRR 156 Query: 180 ---KRIVNTAIVTRVIKVLGEEG 239 K +V TA +T ++K LGEEG Sbjct: 157 ENGKNVVTTASITCLMKCLGEEG 179 >ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 459 Score = 101 bits (252), Expect = 6e-20 Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 4/83 (4%) Frame = +3 Query: 3 YRDVEKVNLGLRKATEFFYWVESHFGFTHNEATCKEMALVFAKGNSLKSLWGFLKEMSR- 179 Y D +K++LGL+KA EFF+W+E HFGF HNE TC++MA + AKGN K LW FL+++SR Sbjct: 97 YIDPKKISLGLQKALEFFFWIEIHFGFGHNEITCRDMACLLAKGNDFKGLWDFLRQVSRR 156 Query: 180 ---KRIVNTAIVTRVIKVLGEEG 239 K +V TA +T ++K LGEEG Sbjct: 157 ENGKNVVTTASITCLMKCLGEEG 179 >ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Vitis vinifera] Length = 432 Score = 101 bits (251), Expect = 7e-20 Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 3/82 (3%) Frame = +3 Query: 3 YRDVEKVNLGLRKATEFFYWVESHFGFTHNEATCKEMALVFAKGNSLKSLWGFLKEMSRK 182 YRD KV LG+ KA EF+ WVE+ FGF+HNE TC+EM V A+GN LK LW FL EM+RK Sbjct: 90 YRDPHKVKLGVEKAMEFYSWVETQFGFSHNEMTCREMGCVLARGNRLKVLWEFLHEMARK 149 Query: 183 ---RIVNTAIVTRVIKVLGEEG 239 +V TA +T ++KVLGEEG Sbjct: 150 GGNGVVTTATITCLMKVLGEEG 171