BLASTX nr result

ID: Cephaelis21_contig00025102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025102
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...    73   7e-21
ref|XP_002298105.1| predicted protein [Populus trichocarpa] gi|2...    69   8e-19
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-18
ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...    76   6e-12
emb|CBI36299.3| unnamed protein product [Vitis vinifera]               76   6e-12

>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 73.2 bits (178), Expect(2) = 7e-21
 Identities = 34/66 (51%), Positives = 51/66 (77%)
 Frame = +3

Query: 435 AIESFLQNTAFECGIKLDVYSVNIVIKAVCEIGLLDKAHLIVLEVEMLGIRLDVVTCTTL 614
           AIE+F+     +  I+LD++SVNI++KA+CE G LDKA+L+++E+E  G+R DV+T TTL
Sbjct: 160 AIEAFVNEAPKKFDIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYTTL 219

Query: 615 TSAFIR 632
            SAF +
Sbjct: 220 MSAFYK 225



 Score = 53.5 bits (127), Expect(2) = 7e-21
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +2

Query: 620 SFYKINQSYIGNGLWNVMVLNGCLCNIATFN 712
           +FYK N+S IGNGLWN+MVL GCL N+ATFN
Sbjct: 222 AFYKNNRSEIGNGLWNLMVLKGCLPNLATFN 252


>ref|XP_002298105.1| predicted protein [Populus trichocarpa] gi|222845363|gb|EEE82910.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 68.6 bits (166), Expect(2) = 8e-19
 Identities = 30/65 (46%), Positives = 50/65 (76%)
 Frame = +3

Query: 438 IESFLQNTAFECGIKLDVYSVNIVIKAVCEIGLLDKAHLIVLEVEMLGIRLDVVTCTTLT 617
           IE+F+     +  I+ D++SVNI++KA+CE G+LDK++L+++E+E  G+  DV+T TTLT
Sbjct: 161 IETFVNEAPKKFDIEFDIFSVNIIVKALCERGVLDKSYLLMVEMEKSGVTPDVITYTTLT 220

Query: 618 SAFIR 632
           SA+ +
Sbjct: 221 SAYYK 225



 Score = 51.2 bits (121), Expect(2) = 8e-19
 Identities = 21/31 (67%), Positives = 27/31 (87%)
 Frame = +2

Query: 620 SFYKINQSYIGNGLWNVMVLNGCLCNIATFN 712
           ++YK N++ IGNGLWN+MVL GCL N+ATFN
Sbjct: 222 AYYKNNKAEIGNGLWNLMVLKGCLPNLATFN 252


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score = 70.5 bits (171), Expect(2) = 4e-18
 Identities = 34/64 (53%), Positives = 49/64 (76%)
 Frame = +3

Query: 432 GAIESFLQNTAFECGIKLDVYSVNIVIKAVCEIGLLDKAHLIVLEVEMLGIRLDVVTCTT 611
           GA+E+FL     +  I+LD+ SVNI++KA C+ G L++A+L++LE+E LGI+ DVVT TT
Sbjct: 157 GALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTT 216

Query: 612 LTSA 623
           L SA
Sbjct: 217 LISA 220



 Score = 47.0 bits (110), Expect(2) = 4e-18
 Identities = 24/37 (64%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +2

Query: 605 YDTNISF-YKINQSYIGNGLWNVMVLNGCLCNIATFN 712
           Y T IS  YK  QS I NGLWN+MVL GCL N+ TFN
Sbjct: 214 YTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFN 250


>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Vitis vinifera]
          Length = 405

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 35/66 (53%), Positives = 54/66 (81%)
 Frame = +3

Query: 435 AIESFLQNTAFECGIKLDVYSVNIVIKAVCEIGLLDKAHLIVLEVEMLGIRLDVVTCTTL 614
           AI+ FL++  F+ GI+LDV+SVNIVIKA+C++ +L+KA+++++E+E  G+  DVVT TTL
Sbjct: 163 AIDLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTL 222

Query: 615 TSAFIR 632
            SAF +
Sbjct: 223 ISAFYK 228


>emb|CBI36299.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 35/66 (53%), Positives = 54/66 (81%)
 Frame = +3

Query: 435 AIESFLQNTAFECGIKLDVYSVNIVIKAVCEIGLLDKAHLIVLEVEMLGIRLDVVTCTTL 614
           AI+ FL++  F+ GI+LDV+SVNIVIKA+C++ +L+KA+++++E+E  G+  DVVT TTL
Sbjct: 163 AIDLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTL 222

Query: 615 TSAFIR 632
            SAF +
Sbjct: 223 ISAFYK 228


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