BLASTX nr result

ID: Cephaelis21_contig00025056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025056
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315730.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
gb|ABP49617.1| ubiquitin-protein ligase-like protein [Pyrus comm...    81   1e-13
ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containi...    78   8e-13
ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002530985.1| pentatricopeptide repeat-containing protein,...    77   2e-12

>ref|XP_002315730.1| predicted protein [Populus trichocarpa] gi|222864770|gb|EEF01901.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/66 (69%), Positives = 50/66 (75%)
 Frame = -1

Query: 416 KTLNAYSILCKIAEKGGVTDLRSYDDLIKSLIAEGNTKQADALSRMLVGKDKSSCSRDKG 237
           KTLNAYSILCKI EKGGVT  RSY+DLIKSL  EGNTKQAD LSRM+ G DKS     KG
Sbjct: 694 KTLNAYSILCKIMEKGGVTSWRSYEDLIKSLNQEGNTKQADILSRMIKGDDKSH-ENKKG 752

Query: 236 NNSATL 219
              A++
Sbjct: 753 KKKASV 758


>gb|ABP49617.1| ubiquitin-protein ligase-like protein [Pyrus communis]
          Length = 411

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/66 (69%), Positives = 50/66 (75%)
 Frame = -1

Query: 416 KTLNAYSILCKIAEKGGVTDLRSYDDLIKSLIAEGNTKQADALSRMLVGKDKSSCSRDKG 237
           KTLNAYSIL KI EKGGV+D  S  DLIKSL  EGNTKQAD LSRM+ G+DKS  S+ KG
Sbjct: 345 KTLNAYSILRKIMEKGGVSDWCSSKDLIKSLNQEGNTKQADILSRMIKGRDKSGQSK-KG 403

Query: 236 NNSATL 219
           N  A L
Sbjct: 404 NKEAVL 409


>ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Glycine max]
          Length = 733

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/66 (65%), Positives = 47/66 (71%)
 Frame = -1

Query: 416 KTLNAYSILCKIAEKGGVTDLRSYDDLIKSLIAEGNTKQADALSRMLVGKDKSSCSRDKG 237
           KTLNAYSILCKI EKGG TD  S D+LIKSL  EGNTKQAD LSRM+ G D  +  R  G
Sbjct: 667 KTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMIKGTDGRTLRRG-G 725

Query: 236 NNSATL 219
              AT+
Sbjct: 726 KRKATV 731


>ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
           [Vitis vinifera]
          Length = 763

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = -1

Query: 416 KTLNAYSILCKIAEKGGVTDLRSYDDLIKSLIAEGNTKQADALSRMLVGKDKSSCSRDKG 237
           KTLNAYSILCKI +KGG TD  S  DLI+SL  EGNTKQAD LSRM+ G++K   S+ KG
Sbjct: 697 KTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMIKGEEKVHGSK-KG 755

Query: 236 NNSATLI 216
              A+++
Sbjct: 756 KKQASVV 762


>ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529437|gb|EEF31397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 753

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/65 (64%), Positives = 47/65 (72%)
 Frame = -1

Query: 416 KTLNAYSILCKIAEKGGVTDLRSYDDLIKSLIAEGNTKQADALSRMLVGKDKSSCSRDKG 237
           KTLNAYSILCKI +KGGV+D  S  DLIKSL  EGNTKQAD LSRM+ G +KS     KG
Sbjct: 687 KTLNAYSILCKIMQKGGVSDWSSSKDLIKSLNQEGNTKQADILSRMIKGGEKSH-ENKKG 745

Query: 236 NNSAT 222
              A+
Sbjct: 746 KKQAS 750


Top