BLASTX nr result

ID: Cephaelis21_contig00024937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024937
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               64   1e-08
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    63   3e-08
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]    61   8e-08
emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]    59   3e-07
emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]    59   5e-07

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
 Frame = -2

Query: 348 WKPSVTGLFTIRSAYDQLWPRHEEKSVLSRIWDARFPVKVSCFMWRLLNNLLGFPEILEQ 169
           W PS  G FT +SAY       E+  + ++IW  +FP K+S   WRL+ N L F + + +
Sbjct: 540 WIPSENGHFTTKSAYVDCSNTREKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGK 599

Query: 168 WGFHLPSKCPNC--LSLGTIEHYFAHCSFASAVWCAVAAVLRVD 43
           +  ++ S C  C  +   TI H F +   AS +W      L +D
Sbjct: 600 FVDNIDSNCVCCKNMKTETINHVFLNSDVASYLWKKFGGTLGID 643


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
           gi|241946107|gb|EES19252.1| hypothetical protein
           SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
 Frame = -2

Query: 348 WKPSVTGLFTIRSAY-----DQLWPRHEEKSVLSRIWDARFPVKVSCFMWRLLNNLLGFP 184
           WK ++  LF+++S Y     D+  P H      S+IW ++ P K+  F+W LLNN++   
Sbjct: 628 WKVAIARLFSVKSVYNAMTSDESGPSH------SKIWKSKIPAKIKIFLWLLLNNVILTK 681

Query: 183 EILEQWGFHLPSKCPNCLSLGTIEHYFAHCSFASAVWCAVA 61
           + L +  +     C  C    ++ H F HCS A AVW  VA
Sbjct: 682 DNLIKRKWIGDPTCYFCDQDESVSHLFFHCSTAKAVWAIVA 722


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348  WKPSVTGLFTIRSAYDQLWPRHEEKSVLSRIWDARFPVKVSCFMWRLLNNLLGFPEILEQ 169
            W+    GLF ++ AY  L    E     S +W A+ P K+  F W      +   + L++
Sbjct: 1636 WRGGADGLFKVKEAYRVLVNADEAAFPHSNVWVAKVPTKIXFFAWEATWGKVLTLDRLQR 1695

Query: 168  WGFHLPSKCPNC-LSLGTIEHYFAHCSFASAVWCAVAAVLRVDLDFSGGLYSLLHSF 1
             G+HLP++C  C     TI H   HC+ A  +W  + A+  V   F   +  +L S+
Sbjct: 1696 RGWHLPNRCFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVFPNSVKEVLSSW 1752


>emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
          Length = 1936

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348  WKPSVTGLFTIRSAYDQLWPRHEEKSVLSRIWDARFPVKVSCFMWRLLNNLLGFPEILEQ 169
            W+    GLF ++ AY  L    E     S +W A+ P K+  F W          + L++
Sbjct: 1708 WRGGAEGLFKVKEAYRVLINADEAXFPHSNVWVAKVPTKIIFFAWEATWGKALTLDRLQR 1767

Query: 168  WGFHLPSKCPNC-LSLGTIEHYFAHCSFASAVWCAVAAVLRVDLDFSGGLYSLLHSF 1
             G HLP++C  C     TI H   HC+ A  +W  + A+  V   F   +  +L S+
Sbjct: 1768 RGXHLPNRCFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVFPNSVKEVLSSW 1824


>emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]
          Length = 403

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348 WKPSVTGLFTIRSAYDQLWPRHEEKSVLSRIWDARFPVKVSCFMWRLLNNLLGFPEILEQ 169
           W+    GLF ++ AY  L    E     S +W A+ P K+  F W      +   + L++
Sbjct: 211 WRGGADGLFKVKEAYRVLVNADEAAFPHSNVWVAKVPTKIIFFAWEATWGKVLTLDRLQR 270

Query: 168 WGFHLPSKCPNC-LSLGTIEHYFAHCSFASAVWCAVAAVLRVDLDFSGGLYSLLHSF 1
            G+HLP++C  C     TI H   HC+ A  +W  + A+  V       +  +L S+
Sbjct: 271 RGWHLPNRCFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVLPNSVKEVLSSW 327


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