BLASTX nr result

ID: Cephaelis21_contig00024771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024771
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002279515.2| PREDICTED: flowering time control protein FC...    59   5e-07
emb|CBI22860.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|222865091|gb|EEF02222.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = -2

Query: 195 RLPSPRIRPPMMLGE-MQDRFPPNALQPMSPQKPGPPSTSGLHGFGNIFHPRPADI 31
           R  +  +RPP  LG+ M D  PPNA  PMSPQ  GP S +G+HGFGN   PR  D+
Sbjct: 282 RFQASGLRPPPNLGDPMGDHIPPNAWLPMSPQNMGPSSNAGVHGFGNQLPPRSGDL 337


>ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
          Length = 785

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -2

Query: 195 RLPSPRIRPPMMLGEM--QDRFPPNALQPMSPQKPGPPSTSGLHGFGNIFHPRPADIPAD 22
           R  +P +RP M  G+     R PPNA +PMSPQ  GP S +G+HGFGN   PR  D    
Sbjct: 311 RFQAPGVRPTMNQGDPIGSGRIPPNAWRPMSPQNLGPSSNAGIHGFGNQSLPRSGDGSIS 370

Query: 21  SIP 13
           S P
Sbjct: 371 STP 373


>emb|CBI22860.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -2

Query: 195 RLPSPRIRPPMMLGEM--QDRFPPNALQPMSPQKPGPPSTSGLHGFGNIFHPRPADIPAD 22
           R  +P +RP M  G+     R PPNA +PMSPQ  GP S +G+HGFGN   PR  D    
Sbjct: 234 RFQAPGVRPTMNQGDPIGSGRIPPNAWRPMSPQNLGPSSNAGIHGFGNQSLPRSGDGSIS 293

Query: 21  SIP 13
           S P
Sbjct: 294 STP 296


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