BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024496
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   2e-11
gb|ABK28206.1| unknown [Arabidopsis thaliana]                          75   2e-11
ref|NP_180979.1| RNase H domain-containing protein [Arabidopsis ...    75   2e-11
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    68   2e-09
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    68   2e-09

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 58/240 (24%), Positives = 110/240 (45%)
 Frame = -3

Query: 768  CPESQFVWKISPV*RDGLTPAT*SFQE*ISALISLITIENGQRRLEISIYLLWHLWKVQN 589
            C ES   W ISP+          SF+  +    SL+          +   + W++W  +N
Sbjct: 1109 CDESSRAWYISPLRIHTGNIEAGSFRIWVE---SLLDTHKDTEWWALFWMICWNIWLGRN 1165

Query: 588  KWLFKGEKLEAAIIMQNALG*WNEYEMALEKQKEAQRQLMQPVCYLEHQWCPHAAGMIRL 409
            KW+F+ +KL    +++ A+    E+E     ++ A    ++ +   E+ W     GM++L
Sbjct: 1166 KWVFEKKKLAFQEVVERAVRGVMEFE-----EECAHTSPVETLNTHENGWSVPPVGMVKL 1220

Query: 408  NIATEVK*NCRIGVGLILRDEEGRLILAKASTFDTPQSPCVAELKAIRLAMVEAAYRDIK 229
            N+   V  +  IG+G ++RD EG ++LA        + P +AE  ++R  +  A     +
Sbjct: 1221 NVDAAVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFR 1280

Query: 228  RIEVQIDVKTMVAWLHRKIFLISEASTIVEDIFLL*YLFESCKFLYIRRDWNKSNQVLTR 49
             + V++D K +   L  K   ++    +V+DI  L     +  F +++R  NK   +L +
Sbjct: 1281 NLVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKCSNVVFEHVKRHCNKVAHLLAQ 1340


>gb|ABK28206.1| unknown [Arabidopsis thaliana]
          Length = 293

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 12/261 (4%)
 Frame = -3

Query: 783 NVFLDCPESQFVWKISPV*RDGLTPAT*SFQE*ISALISLITIENGQRRLEISI------ 622
           ++   C  ++ VW ISP+      PA    +   S   +L  + N    LE+ I      
Sbjct: 24  HLLFKCCFARLVWAISPI------PAYPEGEWTDSLYANLYWVLN----LEVEIPKLGKI 73

Query: 621 -----YLLWHLWKVQNKWLFKGEKLEAAIIMQNALG*WNEYEMALEKQKEAQRQLMQPVC 457
                +LLW LWK +N+ +FKG++ +A  +++ A+  + E+    E + +A    ++   
Sbjct: 74  GNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVER-- 131

Query: 456 YLEHQWCPHAAGMIRLNI-ATEVK*NCRIGVGLILRDEEGRLILAKASTFDTPQSPCVAE 280
            L  QW       ++ N  AT    N R G+G ILR+E G ++   A      ++   AE
Sbjct: 132 NLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE 191

Query: 279 LKAIRLAMVEAAYRDIKRIEVQIDVKTMVAWLHRKIFLISEASTIVEDIFLL*YLFESCK 100
           L+A+R A++  +  + KRI  + D + +V  L+   F        +EDI  L + FE  K
Sbjct: 192 LEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFW-PTLQPALEDIQQLLHHFEEVK 250

Query: 99  FLYIRRDWNKSNQVLTRYTLS 37
           F +  R  NK    + R ++S
Sbjct: 251 FEFTPRGGNKVADRIARESIS 271


>ref|NP_180979.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3337363|gb|AAC27408.1| putative non-LTR retroelement
           reverse transcriptase [Arabidopsis thaliana]
           gi|91805481|gb|ABE65469.1| hypothetical protein
           At2g34320 [Arabidopsis thaliana]
           gi|330253864|gb|AEC08958.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 292

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 12/261 (4%)
 Frame = -3

Query: 783 NVFLDCPESQFVWKISPV*RDGLTPAT*SFQE*ISALISLITIENGQRRLEISI------ 622
           ++   C  ++ VW ISP+      PA    +   S   +L  + N    LE+ I      
Sbjct: 24  HLLFKCCFARLVWAISPI------PAYPEGEWTDSLYANLYWVLN----LEVEIPKLGKI 73

Query: 621 -----YLLWHLWKVQNKWLFKGEKLEAAIIMQNALG*WNEYEMALEKQKEAQRQLMQPVC 457
                +LLW LWK +N+ +FKG++ +A  +++ A+  + E+    E + +A    ++   
Sbjct: 74  GNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVER-- 131

Query: 456 YLEHQWCPHAAGMIRLNI-ATEVK*NCRIGVGLILRDEEGRLILAKASTFDTPQSPCVAE 280
            L  QW       ++ N  AT    N R G+G ILR+E G ++   A      ++   AE
Sbjct: 132 NLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE 191

Query: 279 LKAIRLAMVEAAYRDIKRIEVQIDVKTMVAWLHRKIFLISEASTIVEDIFLL*YLFESCK 100
           L+A+R A++  +  + KRI  + D + +V  L+   F        +EDI  L + FE  K
Sbjct: 192 LEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFW-PTLQPALEDIQQLLHHFEEVK 250

Query: 99  FLYIRRDWNKSNQVLTRYTLS 37
           F +  R  NK    + R ++S
Sbjct: 251 FEFTPRGGNKVADRIARESIS 271


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
 Frame = -3

Query: 645  QRRLEISIYLLWHLWKVQNKWLFKGEKLEAAIIMQNALG*WNEYEMALEKQKEAQRQLMQ 466
            +  L++   LLW  W  +N    KG  + + II +N +     ++ AL  +   + + ++
Sbjct: 1421 KEELQLFAVLLWLNWHERNNCYHKGAVVPSDIIYENGVKFLKCFKEALGCRAGVEVKAVE 1480

Query: 465  PVCYLE-HQWCPHAAGMIRLNI--ATEVK*NCRIGVGLILRDEEGRLILAKASTFDTPQS 295
             V      +W   ++G +++N   A   K  C  G G I+RDE G LI+A    F  P S
Sbjct: 1481 EVVPGSLRRWQAPSSGQLKVNCDGAANFKDRC-FGGGTIIRDEFGSLIVAGGKNFQHPVS 1539

Query: 294  PCVAELKAIRLAMVEAAYRDIKRIEVQIDVKTMVAWLHRKIFLISEASTIVEDIFLL*YL 115
              VAEL AI++ +     R ++ I V+ D    +  L+ K   ++    +VEDI     L
Sbjct: 1540 SLVAELLAIKVGLDLVVERRLRNIMVESDCLEAIHLLNSKERCLAPEGGLVEDIQNTMAL 1599

Query: 114  FESCKFLYIRRDWNKSNQVLTRYTLSN 34
                   ++RR+ N +   + ++   N
Sbjct: 1600 VNISSIYHVRREGNTAAHAIAKFVARN 1626


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 52/207 (25%), Positives = 85/207 (41%)
 Frame = -3

Query: 621  YLLWHLWKVQNKWLFKGEKLEAAIIMQNALG*WNEYEMALEKQKEAQRQLMQPVCYLEHQ 442
            Y+LW++W  +N+ +F+     A ++ Q  +    ++     K     R           +
Sbjct: 1141 YILWNVWVERNRRVFEHTSQPATVVGQRIMRQVEDFNNYAVKIYGGMRS---SAALSPSR 1197

Query: 441  WCPHAAGMIRLNIATEVK*NCRIGVGLILRDEEGRLILAKASTFDTPQSPCVAELKAIRL 262
            W     G I+LN    +     +G+G+I RD EG++  A          P VAE KAI +
Sbjct: 1198 WYAPPVGAIKLNTDASLAEEGWVGLGVIARDSEGKVCFAATRRVRAYWPPEVAECKAIYM 1257

Query: 261  AMVEAAYRDIKRIEVQIDVKTMVAWLHRKIFLISEASTIVEDIFLL*YLFESCKFLYIRR 82
            A   A       +  + D       L +     S+   I+ DI  +   F S  F +++R
Sbjct: 1258 ATRLAQAHGYGDVIFESDSLVATKRLTKAAIFFSDLDAILGDILSMCNAFSSVSFSHVKR 1317

Query: 81   DWNKSNQVLTRYTLSNGISQC*ENTCP 1
            D N     L R  +  G+ QC E+ CP
Sbjct: 1318 DGNTVAHNLAR-VVPFGVEQCWEHHCP 1343