BLASTX nr result

ID: Cephaelis21_contig00024037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024037
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...   179   3e-43
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...   124   1e-26
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu...   124   1e-26
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               86   9e-24
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm...    72   9e-12

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/94 (93%), Positives = 90/94 (95%)
 Frame = +3

Query: 48  PIGIAAFGLCLPFLIKNAGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKREST 227
           PIGIAAFGLCLPF+IKN+GSARESAGNNRKEGVHVAA  APFLVNGAQQVRHLLQKREST
Sbjct: 69  PIGIAAFGLCLPFIIKNSGSARESAGNNRKEGVHVAAVSAPFLVNGAQQVRHLLQKREST 128

Query: 228 SDNHASARQRVEWPRADLFGYIIQVESRVTGTAV 329
           SDNH SARQRVEWPRADLFGYIIQVESRVTG AV
Sbjct: 129 SDNHVSARQRVEWPRADLFGYIIQVESRVTGKAV 162


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 [Beta vulgaris subsp. vulgaris]
          Length = 515

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/98 (69%), Positives = 73/98 (74%)
 Frame = +3

Query: 33  RSARWPIGIAAFGLCLPFLIKNAGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQ 212
           RSARWPIGIAAFGLCL FLIKN+GSARESAGNNRKEGVHVAAA APFLVN A       +
Sbjct: 59  RSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTK 118

Query: 213 KRESTSDNHASARQRVEWPRADLFGYIIQVESRVTGTA 326
           +R      +ASA        +DLFGYIIQVES VTGTA
Sbjct: 119 ERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA 156



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/100 (41%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
 Frame = +2

Query: 191 AGSASTTKERIHFR*PRL-C*AACGMAESGPFWIYNPSRE*SYGNSRLMENYXXXXXXXX 367
           AGSA+TTKERIHF+       AACGMA S  F           G + LMEN         
Sbjct: 111 AGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRA 170

Query: 368 XXXXXXXXXXXXNSPVRIRNLWGPIYSISRAPKKTPPPFG 487
                       NS  RI+N WGP    S +P KTP PFG
Sbjct: 171 LFSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFG 209


>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 464

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/98 (69%), Positives = 73/98 (74%)
 Frame = +3

Query: 33  RSARWPIGIAAFGLCLPFLIKNAGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQ 212
           RSARWPIGIAAFGLCL FLIKN+GSARESAGNNRKEGVHVAAA APFLVN A       +
Sbjct: 8   RSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTK 67

Query: 213 KRESTSDNHASARQRVEWPRADLFGYIIQVESRVTGTA 326
           +R      +ASA        +DLFGYIIQVES VTGTA
Sbjct: 68  ERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA 105



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/100 (41%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
 Frame = +2

Query: 191 AGSASTTKERIHFR*PRL-C*AACGMAESGPFWIYNPSRE*SYGNSRLMENYXXXXXXXX 367
           AGSA+TTKERIHF+       AACGMA S  F           G + LMEN         
Sbjct: 60  AGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRA 119

Query: 368 XXXXXXXXXXXXNSPVRIRNLWGPIYSISRAPKKTPPPFG 487
                       NS  RI+N WGP    S +P KTP PFG
Sbjct: 120 LFSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFG 158


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 86.3 bits (212), Expect(2) = 9e-24
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +2

Query: 65  LRALPALSNKKCRLGPGKRWEQQKGRGPCSCCARPLLSQWGT 190
           LRALPAL NK+ RLGPGKRW+QQKGRGPCSCCARPLLSQWG+
Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWGS 223



 Score = 48.9 bits (115), Expect(2) = 9e-24
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +1

Query: 190 SRFGIYYKRENPLQITTPLLGS 255
           SRFGIYYKRENPLQITTPLLGS
Sbjct: 223 SRFGIYYKRENPLQITTPLLGS 244


>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
           gi|223525904|gb|EEF28320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 72.4 bits (176), Expect(2) = 9e-12
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +2

Query: 56  NSSLRALPALSNKKCRLGPGKRWEQQKGRGPCSCCARPLLSQWGT 190
           +SSL+ALPALSNK  RL P +RW+Q KG+GPCSC  RPLLS+WG+
Sbjct: 34  DSSLQALPALSNKNFRLDPRERWQQHKGKGPCSCYVRPLLSKWGS 78



 Score = 22.3 bits (46), Expect(2) = 9e-12
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 33 RSARWPIG 56
          RSARWPIG
Sbjct: 26 RSARWPIG 33


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