BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023925
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   3e-15
ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    63   2e-09
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    68   3e-09
ref|XP_002465612.1| hypothetical protein SORBIDRAFT_01g042140 [S...    58   5e-09
ref|XP_002466153.1| hypothetical protein SORBIDRAFT_01g002325 [S...    60   1e-08

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 72.8 bits (177), Expect(2) = 3e-15
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +3

Query: 6    VWTLQVKPKLKLFFWKCLHGWLSINESVRRRGMNVDCICCRCGMEIETFEHLFFQCIESQ 185
            +W  ++ PK+KLF WK +H  L++  ++R+RGMN+D  C RCG + ET EHL + C ES 
Sbjct: 1054 IWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESS 1113

Query: 186  MVW 194
              W
Sbjct: 1114 RAW 1116



 Score = 35.8 bits (81), Expect(2) = 3e-15
 Identities = 34/146 (23%), Positives = 59/146 (40%)
 Frame = +1

Query: 187  WFGSLSLINIEPTQHGSFSFVDWWKHINQAVSGSGDRAGVELFINLV*QIWKARNCWQFQ 366
            W+ S   I+    + GSF     W  +   +    D     LF  +   IW  RN W F+
Sbjct: 1116 WYISPLRIHTGNIEAGSFRI---W--VESLLDTHKDTEWWALFWMICWNIWLGRNKWVFE 1170

Query: 367  HKVTPTMQIVQSAICEWSEFADAKKMGGKVSKQIMTFRTCQQSSIAPCLDTCHIFVGSET 546
             K     ++V+ A+    EF +        +  + T  T +     P +    + V +  
Sbjct: 1171 KKKLAFQEVVERAVRGVMEFEEECAH----TSPVETLNTHENGWSVPPVGMVKLNVDAAV 1226

Query: 547  LLSAGITGVGQILKNSQGMVLRAKSC 624
                GI G+G ++++++G VL A  C
Sbjct: 1227 FKHVGI-GMGGVVRDAEGDVLLATCC 1251


>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 63.2 bits (152), Expect(2) = 2e-09
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = +3

Query: 6   VWTLQVKPKLKLFFWKCLHGWLSINESVRRRGMNVDCICCRCGMEIETFEHLFFQCIESQ 185
           +W L+  PK+K F WK L G L+  ++++RR +     C RC  E ET +HLFF C  +Q
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 186 MVWK 197
            VW+
Sbjct: 78  QVWR 81



 Score = 25.4 bits (54), Expect(2) = 2e-09
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +1

Query: 310 LFINLV*QIWKARNCWQFQHKVTPTMQIVQSAICEWSEFADAKKMGGKVSKQIMTFRTCQ 489
           L I ++ ++WK+RN   FQ K       +Q A  +  E+ D       +++Q+ + R  Q
Sbjct: 119 LAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRH-Q 177

Query: 490 QSSIA 504
           Q ++A
Sbjct: 178 QPTMA 182


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +3

Query: 6   VWTLQVKPKLKLFFWKCLHGWLSINESVRRRGMNVDCICCRCGMEIETFEHLFFQCIESQ 185
           +W L V PK+K F W+C+ G L+ N  +R R ++ D IC RC +E ET  H+ F C  +Q
Sbjct: 37  IWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQ 96

Query: 186 MVWK 197
            VW+
Sbjct: 97  SVWR 100


>ref|XP_002465612.1| hypothetical protein SORBIDRAFT_01g042140 [Sorghum bicolor]
           gi|241919466|gb|EER92610.1| hypothetical protein
           SORBIDRAFT_01g042140 [Sorghum bicolor]
          Length = 742

 Score = 57.8 bits (138), Expect(2) = 5e-09
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = +3

Query: 6   VWTLQVKPKLKLFFWKCLHGWLSINESVRRRGMNVDCICCRCGMEIETFEHLFFQCIESQ 185
           +W  +  PK+K FFW  LHG L       R G+    +C  CG + ET +HL   C+ S+
Sbjct: 584 LWQTKAPPKVKFFFWLALHGRLWTAARRARHGLQQTAVCSLCGQQDETSDHLLLACVYSR 643

Query: 186 MVW 194
            VW
Sbjct: 644 EVW 646



 Score = 29.6 bits (65), Expect(2) = 5e-09
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 187 WFGSLSLINIEPTQHGSF-SFVDWWKHINQAVSGSGDRAGVELFINLV*QIWKARN 351
           WF  LS+ N++    G+  +  DWW   +  +     ++   + + +  +IWK RN
Sbjct: 646 WFRLLSIANLQQHAPGTDDTLADWWLETSSIIHTDVRKSFDSIVLLVTWEIWKERN 701


>ref|XP_002466153.1| hypothetical protein SORBIDRAFT_01g002325 [Sorghum bicolor]
           gi|241920007|gb|EER93151.1| hypothetical protein
           SORBIDRAFT_01g002325 [Sorghum bicolor]
          Length = 763

 Score = 59.7 bits (143), Expect(2) = 1e-08
 Identities = 23/64 (35%), Positives = 32/64 (50%)
 Frame = +3

Query: 3   MVWTLQVKPKLKLFFWKCLHGWLSINESVRRRGMNVDCICCRCGMEIETFEHLFFQCIES 182
           + W   + PK+K FFW  LHG L   E  RR G+  +  C  C    ET +HL   C+  
Sbjct: 600 LAWKAMIPPKMKFFFWLALHGRLWTAERRRRHGLQAEAACALCSQHDETIDHLLIACVFP 659

Query: 183 QMVW 194
           + +W
Sbjct: 660 REIW 663



 Score = 26.6 bits (57), Expect(2) = 1e-08
 Identities = 16/70 (22%), Positives = 31/70 (44%)
 Frame = +1

Query: 205 LINIEPTQHGSFSFVDWWKHINQAVSGSGDRAGVELFINLV*QIWKARNCWQFQHKVTPT 384
           L+++ PT+  +    +WW    + +     RA   + I +   +WK RN   F  +   T
Sbjct: 672 LLHLAPTEGSALQ--EWWISSRKQIPIRFRRAFDSVVIVVSWNVWKERNSRTFDGRNRTT 729

Query: 385 MQIVQSAICE 414
            Q+  + + E
Sbjct: 730 AQVCDAILDE 739