BLASTX nr result

ID: Cephaelis21_contig00022523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022523
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634702.1| PREDICTED: replication factor A protein 1-li...    64   2e-08
emb|CAN65830.1| hypothetical protein VITISV_038135 [Vitis vinifera]    62   8e-08
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...    60   2e-07
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...    60   2e-07
ref|XP_002467989.1| hypothetical protein SORBIDRAFT_01g037705 [S...    60   3e-07

>ref|XP_003634702.1| PREDICTED: replication factor A protein 1-like [Vitis vinifera]
           gi|302143225|emb|CBI20520.3| unnamed protein product
           [Vitis vinifera]
          Length = 75

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -3

Query: 495 LRYIMVVKVSDASAEAGLSVFNEEA*KILGYSADELNKLKTE 370
           LRYIMVVKVSDAS EA LS+FNE+A +I GYSADEL+KLK++
Sbjct: 23  LRYIMVVKVSDASGEAWLSLFNEQAERIFGYSADELDKLKSQ 64


>emb|CAN65830.1| hypothetical protein VITISV_038135 [Vitis vinifera]
          Length = 904

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
 Frame = -3

Query: 519 LEMIQIQWLR--YIMVVKVSDASAEAGLSVFNEEA*KILGYSADELNKLKTE 370
           L +I +  LR  YIMVVKVSDAS EA LS+FNE+A +I GYSADEL+KLK++
Sbjct: 841 LGLISVLHLRVEYIMVVKVSDASGEAWLSLFNEQAERIFGYSADELDKLKSQ 892


>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -3

Query: 528 DRCLEMIQIQWLRYIMVVKVSDASAEAGLSVFNEEA*KILGYSADELNKLKTECSHPSS 352
           D C +  +   LRYIMVV+VSDAS EA +S FNEEA +I+G SADEL++LK++    +S
Sbjct: 443 DNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENS 501


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -3

Query: 528 DRCLEMIQIQWLRYIMVVKVSDASAEAGLSVFNEEA*KILGYSADELNKLKTECSHPSS 352
           D C +  +   LRYIMVV+VSDAS EA +S FNEEA +I+G SADEL++LK++    +S
Sbjct: 486 DNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENS 544


>ref|XP_002467989.1| hypothetical protein SORBIDRAFT_01g037705 [Sorghum bicolor]
           gi|241921843|gb|EER94987.1| hypothetical protein
           SORBIDRAFT_01g037705 [Sorghum bicolor]
          Length = 122

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = -3

Query: 528 DRCLEMIQIQWLRYIMVVKVSDASAEAGLSVFNEEA*KILGYSADELNKLKTE 370
           +RC +      LRYIMV+KVSD + EA +SVFNE A KI+GYSADEL++++ E
Sbjct: 70  ERCNKNASECSLRYIMVIKVSDPNGEAWVSVFNEHAEKIIGYSADELDRIRKE 122


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