BLASTX nr result

ID: Cephaelis21_contig00022479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022479
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...   141   6e-32
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arab...   105   4e-21

>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/145 (57%), Positives = 112/145 (77%)
 Frame = +2

Query: 2   LYTLFSEASRPTGPILSNMLLSLYADSKRPIEAAELYDLMKKEGEFPSLSAFNLFLECLV 181
           LYTLFS +S P  P+ S+MLLS+ ++SK   E+AELY LMKK+G  PS+++ NLFLE LV
Sbjct: 99  LYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLV 158

Query: 182 TSNQYGKTLEVFSYAVNTGMRVDQFSCGKAVQAAVKLGDLKGALEKVQSMKKRGLKPSGF 361
           ++ +Y  TL++FS  V +G+R DQF  GKA+QAAVKLGDLK A+E +  MK+ G+ P  F
Sbjct: 159 STKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVF 218

Query: 362 IYNVLIGGLCKERKVTEARKLFDEM 436
           +YNV+IGGLCKE+++ +A KLFDEM
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEM 243


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/145 (48%), Positives = 100/145 (68%)
 Frame = +2

Query: 2   LYTLFSEASRPTGPILSNMLLSLYADSKRPIEAAELYDLMKKEGEFPSLSAFNLFLECLV 181
           L++ FS  S P    LS+MLLS+   SK   EA ELY+ M+++G+ PSL + +L   CLV
Sbjct: 93  LFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLV 152

Query: 182 TSNQYGKTLEVFSYAVNTGMRVDQFSCGKAVQAAVKLGDLKGALEKVQSMKKRGLKPSGF 361
              Q+ K +++F    N+G R D F   KA+QAAVKL +LK  +E + SM+KRG++P+ F
Sbjct: 153 NEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVF 212

Query: 362 IYNVLIGGLCKERKVTEARKLFDEM 436
           IYNVLIGGLC+E+++ +A K+FDEM
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEM 237



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/131 (26%), Positives = 61/131 (46%)
 Frame = +2

Query: 44  ILSNMLLSLYADSKRPIEAAELYDLMKKEGEFPSLSAFNLFLECLVTSNQYGKTLEVFSY 223
           I  N L+  + D K   +A E    M ++G  PS+  +N  ++       + +  ++   
Sbjct: 422 ITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQ 481

Query: 224 AVNTGMRVDQFSCGKAVQAAVKLGDLKGALEKVQSMKKRGLKPSGFIYNVLIGGLCKERK 403
               G++ +  S G  +    K G +  A   ++ M  RG+ P+  +YN+LI G C   K
Sbjct: 482 MEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGK 541

Query: 404 VTEARKLFDEM 436
           V +A + FDEM
Sbjct: 542 VKDALRFFDEM 552



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 54/111 (48%)
 Frame = +2

Query: 104 ELYDLMKKEGEFPSLSAFNLFLECLVTSNQYGKTLEVFSYAVNTGMRVDQFSCGKAVQAA 283
           E  D M+K G  P++  +N+ +  L    +     ++F    N  +     +    +   
Sbjct: 197 EFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGY 256

Query: 284 VKLGDLKGALEKVQSMKKRGLKPSGFIYNVLIGGLCKERKVTEARKLFDEM 436
            K+G+L  A +  + MK++ + P+   +N L+ GLCK RK+ EAR L  EM
Sbjct: 257 CKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307


>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/127 (47%), Positives = 87/127 (68%)
 Frame = +2

Query: 56  MLLSLYADSKRPIEAAELYDLMKKEGEFPSLSAFNLFLECLVTSNQYGKTLEVFSYAVNT 235
           MLLS+ ++SK   + +ELYD M++EG  PS     + +E LV S ++   L++F   V  
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 236 GMRVDQFSCGKAVQAAVKLGDLKGALEKVQSMKKRGLKPSGFIYNVLIGGLCKERKVTEA 415
           G R D+   G+A+ AAVKLGDLK A+E  ++MK+R + P+ F+YNVLIGGLCKE+++ +A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 416 RKLFDEM 436
            KLF EM
Sbjct: 121 EKLFGEM 127



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
 Frame = +2

Query: 44  ILSNMLLSLYADSKRPIEAAELYDLMKKEGEFPSLSAFNLFLECLVTSNQ-YGKTLEVFS 220
           I  N LLS    ++R  EA  + + +K  G  P    +++  + L+ S+   G  L+++ 
Sbjct: 172 ITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYR 231

Query: 221 YAVNTGMRVDQFSCGKAVQAAVKLGDLKGALEKVQSMKKRGLKPSGFIYNVLIGGLCKER 400
            A+  G+++D ++C   +    K G ++ A E ++S+ + GL P   IYN ++ G C+  
Sbjct: 232 EAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIG 291

Query: 401 KVTEARKLFDEM 436
            +  A    ++M
Sbjct: 292 DMDRAILTIEQM 303


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  117 bits (293), Expect = 1e-24
 Identities = 64/132 (48%), Positives = 85/132 (64%)
 Frame = +2

Query: 41  PILSNMLLSLYADSKRPIEAAELYDLMKKEGEFPSLSAFNLFLECLVTSNQYGKTLEVFS 220
           P  S+ LL L + SK   EA +LY  M+K+G  PS  + N  L  LV S  + KTL VF+
Sbjct: 87  PFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFA 146

Query: 221 YAVNTGMRVDQFSCGKAVQAAVKLGDLKGALEKVQSMKKRGLKPSGFIYNVLIGGLCKER 400
             +++G R D  + GKAVQAAV L DL    E ++SM K G+ PS F YN+++GGLCK R
Sbjct: 147 DVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVR 206

Query: 401 KVTEARKLFDEM 436
           ++ +ARKLFDEM
Sbjct: 207 RIKDARKLFDEM 218


>ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata] gi|297317348|gb|EFH47770.1| hypothetical protein
           ARALYDRAFT_350399 [Arabidopsis lyrata subsp. lyrata]
          Length = 1202

 Score =  105 bits (262), Expect = 4e-21
 Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   LYTLFSEASRPTGPILSNMLLS-LYADSKRPIEAAELYDLMKKEGEFPSLSAFNLFLECL 178
           L++ FS +S       S +LLS L  +SK   EAA+L+  ++ EG FPS  +  L L+ L
Sbjct: 468 LFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHL 527

Query: 179 VTSNQYGKTLEVFSYAVNTGMRVDQFSCGKAVQAAVKLGDLKGALEKVQSMKKRGLKPSG 358
           V + Q+  T+ VF   + +  R  +F  GKA+QAAVKL D+   LE    MK   + P+ 
Sbjct: 528 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTV 587

Query: 359 FIYNVLIGGLCKERKVTEARKLFDEM 436
           FIYNVLI GLCK R++ +A +LFDEM
Sbjct: 588 FIYNVLIDGLCKVRQMKDAEQLFDEM 613


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