BLASTX nr result

ID: Cephaelis21_contig00022474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022474
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi...   364   3e-98
ref|XP_002513638.1| pentatricopeptide repeat-containing protein,...   351   2e-94
ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|2...   340   6e-91
ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containi...   339   9e-91

>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
            [Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
            protein product [Vitis vinifera]
          Length = 295

 Score =  387 bits (994), Expect = e-105
 Identities = 179/230 (77%), Positives = 208/230 (90%)
 Frame = -3

Query: 1071 MLCLRFTPSVFTKRLEGVQPSRINKNNVVCAAKGPRPRYPRVWKTRKKVGTISKSLKLVQ 892
            MLCLR++P+  T+RL+ V+  +  ++ VVC AKGPRPRYPRVWKTR+++GTISKS KLV 
Sbjct: 1    MLCLRYSPATITRRLDAVEIPKNPRSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKLVD 60

Query: 891  CIKELSNVKEEVYGALDSFIAWDLEFPLIIVKKALKTLEHEKEWKRIIQVTKWMLSKGQG 712
            CIK LSNVKEEVYGALDSFIAW+LEFPLI VKKALKTLE +KEWKRIIQVTKWMLSKGQG
Sbjct: 61   CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEDQKEWKRIIQVTKWMLSKGQG 120

Query: 711  RTMGTYYMLLNALAEDGRLDEAEELWTKLFSENLECLPRIFFQKMLSVYYCREMHEKMLE 532
            RTMG+Y+ LLNALAEDGRLDEAEELWTKLFSENLE LPR+F+ KM+S+YY R+MHEKM E
Sbjct: 121  RTMGSYFTLLNALAEDGRLDEAEELWTKLFSENLESLPRVFYDKMISIYYRRDMHEKMFE 180

Query: 531  LFADMEELGVRPTMAVVKMIGDVFQKLGMMDKYQKLNKKYPPPKWEYRYV 382
            +FADMEELG+RP  ++VKM+GDVFQKLGM+DKY+KL KKYPPPKWEYRY+
Sbjct: 181  IFADMEELGIRPNTSIVKMVGDVFQKLGMLDKYEKLQKKYPPPKWEYRYI 230


>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
            [Cucumis sativus]
          Length = 331

 Score =  364 bits (934), Expect = 3e-98
 Identities = 181/305 (59%), Positives = 235/305 (77%), Gaps = 1/305 (0%)
 Frame = -3

Query: 1089 FRASGQMLCLRFTPSVFTKRLEGVQPSRINKNNVVCAAKGPRPRYPRVWKTRKKVGTISK 910
            F AS +ML L +T  V +KR+E V  S    ++VVCAAKGPRPRYPRVWKT+K++GTISK
Sbjct: 13   FLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISK 72

Query: 909  SLKLVQCIKELSNVKEEVYGALDSFIAWDLEFPLIIVKKALKTLEHEKEWKRIIQVTKWM 730
            + KLV C+K LSNVKEEVYGALDSFIAW+LEFPLI VKKALKTLE+++EWKRIIQ+TKWM
Sbjct: 73   AAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWM 132

Query: 729  LSKGQGRTMGTYYMLLNALAEDGRLDEAEELWTKLFSENLECLPRIFFQKMLSVYYCREM 550
            LSKGQGRTMG+Y+ LLNALAEDGRLDEAEELW KLFS++LE +PRIFF KM+S+YY + M
Sbjct: 133  LSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAM 192

Query: 549  HEKMLELFADMEELGVRPTMAVVKMIGDVFQKLGMMDKYQKLNKKYPPPKWEYRYVXXXX 370
            H+K+ E+FADMEELGV+P MA+V  +G+VFQ+LGM+DKY+KL KKYPPPKWEYRY+    
Sbjct: 193  HDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKR 252

Query: 369  XXXXXXXXXXXXXAYDSGATKLLNESNENVDNNSIVTTDYPEI-EQDNKVDNYQNHAADP 193
                           ++G +      +  ++++S  + D  EI  +D+ +++ ++ + DP
Sbjct: 253  VKIRAKYLS------ENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDEDMSEDP 306

Query: 192  ADYVE 178
             + +E
Sbjct: 307  DEILE 311


>ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547546|gb|EEF49041.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 359

 Score =  351 bits (901), Expect = 2e-94
 Identities = 172/241 (71%), Positives = 204/241 (84%)
 Frame = -3

Query: 1104 RREPKFRASGQMLCLRFTPSVFTKRLEGVQPSRINKNNVVCAAKGPRPRYPRVWKTRKKV 925
            +++ K  +  QMLCLR    + + R E ++ S+ + ++VV A KG RPR PRVWKT+ ++
Sbjct: 24   KKKRKILSWRQMLCLRPPLPLISTRFEVIKFSK-STSSVVSALKGARPRAPRVWKTKPRI 82

Query: 924  GTISKSLKLVQCIKELSNVKEEVYGALDSFIAWDLEFPLIIVKKALKTLEHEKEWKRIIQ 745
            GTISKS KLV+CIK LSNVKEEVYGALDS IAW+LEFPLI VKKALKTLE+E+EWKRIIQ
Sbjct: 83   GTISKSAKLVECIKGLSNVKEEVYGALDSLIAWELEFPLIAVKKALKTLENEQEWKRIIQ 142

Query: 744  VTKWMLSKGQGRTMGTYYMLLNALAEDGRLDEAEELWTKLFSENLECLPRIFFQKMLSVY 565
            V KWMLSKGQGRTMGTY+ LLNALAED RLDEAEELWTKLFS+NLE  PR FF KM+S+Y
Sbjct: 143  VIKWMLSKGQGRTMGTYFTLLNALAEDERLDEAEELWTKLFSDNLEGTPRNFFDKMISIY 202

Query: 564  YCREMHEKMLELFADMEELGVRPTMAVVKMIGDVFQKLGMMDKYQKLNKKYPPPKWEYRY 385
            Y REMHEKM E+FADMEELGVRP++++V M+G VFQKLGM+DKY+KL KKYPPPKWEYRY
Sbjct: 203  YKREMHEKMFEIFADMEELGVRPSVSIVNMMGSVFQKLGMLDKYRKLKKKYPPPKWEYRY 262

Query: 384  V 382
            +
Sbjct: 263  I 263


>ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|222836055|gb|EEE74476.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  340 bits (871), Expect = 6e-91
 Identities = 154/202 (76%), Positives = 184/202 (91%)
 Frame = -3

Query: 987 VCAAKGPRPRYPRVWKTRKKVGTISKSLKLVQCIKELSNVKEEVYGALDSFIAWDLEFPL 808
           VCAAKGPRPRYPRVWKT++++GTISKS KLV CIK LSNVKEEVYGALDSF+AW+LEFPL
Sbjct: 1   VCAAKGPRPRYPRVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFPL 60

Query: 807 IIVKKALKTLEHEKEWKRIIQVTKWMLSKGQGRTMGTYYMLLNALAEDGRLDEAEELWTK 628
           I VKKAL+ LE ++EWKRIIQVTKWMLSKGQGRTMGTY+ L+NALAEDGRLDE EELWTK
Sbjct: 61  IAVKKALRALEEQQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWTK 120

Query: 627 LFSENLECLPRIFFQKMLSVYYCREMHEKMLELFADMEELGVRPTMAVVKMIGDVFQKLG 448
           LFS+ LE  PR+ F KM+S+YY R+MH+++ E+FADMEELG+RP++++V M+G+VFQ+LG
Sbjct: 121 LFSQYLEGTPRMMFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRLG 180

Query: 447 MMDKYQKLNKKYPPPKWEYRYV 382
           MMDKY+KL KKYPPPKW YRY+
Sbjct: 181 MMDKYEKLKKKYPPPKWIYRYI 202


>ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
            [Glycine max]
          Length = 343

 Score =  339 bits (869), Expect = 9e-91
 Identities = 169/287 (58%), Positives = 208/287 (72%)
 Frame = -3

Query: 1071 MLCLRFTPSVFTKRLEGVQPSRINKNNVVCAAKGPRPRYPRVWKTRKKVGTISKSLKLVQ 892
            ML L  +P +  K  E ++     +  V+CAAKG RPRYPRVWKT KK+GTISK+ KLV 
Sbjct: 1    MLALTDSPLLIAKTFEAIKIPTSTRGTVLCAAKGQRPRYPRVWKTHKKIGTISKAAKLVN 60

Query: 891  CIKELSNVKEEVYGALDSFIAWDLEFPLIIVKKALKTLEHEKEWKRIIQVTKWMLSKGQG 712
             IKELSNVKEEVYGALDS++AW+LEFPLI VKKALKTLE E+EWKR+IQVTKWMLSKGQG
Sbjct: 61   SIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKGQG 120

Query: 711  RTMGTYYMLLNALAEDGRLDEAEELWTKLFSENLECLPRIFFQKMLSVYYCREMHEKMLE 532
            +TMG+Y+ LLNAL ED RLDEAEELWTKL  + +E LPR FF KM+S+Y+ R MHEKM E
Sbjct: 121  KTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFE 180

Query: 531  LFADMEELGVRPTMAVVKMIGDVFQKLGMMDKYQKLNKKYPPPKWEYRYVXXXXXXXXXX 352
            +FADMEEL +RP +AVV MIGD F++LGM+DKYQKL+ KYPPP+WEYRY+          
Sbjct: 181  IFADMEELCLRPNIAVVSMIGDAFKELGMLDKYQKLHAKYPPPQWEYRYI--------RG 232

Query: 351  XXXXXXXAYDSGATKLLNESNENVDNNSIVTTDYPEIEQDNKVDNYQ 211
                      S       E + NV+ NS +  +Y   E+ +++ + Q
Sbjct: 233  KRVKVKVEVQSNQVNTYIERHGNVEPNSDLNKNYRLSEKTSEIVDQQ 279


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