BLASTX nr result
ID: Cephaelis21_contig00022408
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00022408
(1241 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 102 2e-19
ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [S... 82 3e-13
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia... 82 3e-13
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo... 82 4e-13
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 81 5e-13
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 102 bits (254), Expect = 2e-19
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Frame = +2
Query: 17 WNSDLIYKTFCKPDAEAILILPTSALGSQDKLHKIHSKIGAYTVKSTSTWLAKLRHQHPH 196
WN DL+ K + D I + S G+ D + I++ G Y+VKS L KL Q
Sbjct: 425 WNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHA 484
Query: 197 QLESSSRLELTKKIWKRTWEMQIKGKIKHFRLRTYHLLLPTGHQLQLSEIHLDSTCKICR 376
L S + + + ++ W+ KIKHF R+ H LPT L+ + D TC+ C
Sbjct: 485 SLPSPNEVS-AQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCG 543
Query: 377 EAPEAIEHLLFHCTKV*RIWELSLVS-WPGLQKFTDHFQGWWEQICSIRMLSINQDRIEF 553
EA E + HLLF C IWE + + PG ++ F E I + S +D +
Sbjct: 544 EASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQ-SARKD-VSL 601
Query: 554 TAYLL*SIWKTRNDFTFNAVMVSVAKIVERA---R*EWQEFLSIHEQK 688
++ IWK RND FN S+ +++A + +W+E L+ +EQ+
Sbjct: 602 FPFIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWKESLNCNEQQ 649
>ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [Sorghum bicolor]
gi|241937862|gb|EES11007.1| hypothetical protein
SORBIDRAFT_06g020406 [Sorghum bicolor]
Length = 395
Score = 82.0 bits (201), Expect = 3e-13
Identities = 94/402 (23%), Positives = 159/402 (39%), Gaps = 18/402 (4%)
Frame = +2
Query: 23 SDLIYKTFCKPDAEAILILPTSALGSQDKLHKIHSKIGAYTVKSTSTWLAKLRHQHPHQL 202
S+L+ + F D+EAIL +P S +D H K G +TV+S L +L+
Sbjct: 1 SELVKRVFYPIDSEAILQMPLSMRKQKDCWAWHHEKNGLFTVRSAYRMLIELKKSREDYF 60
Query: 203 E---SSSRLELTKKIWKRTWEMQIKGKIKHFRLRTYHLLLPTGHQLQLSEIHLDSTCKIC 373
E + S ++K WK+ W M++ KIK F R +PT L+ + S CKIC
Sbjct: 61 EGRANCSDFATSQKEWKKLWSMKLPSKIKVFCWRLALNSIPTASVLKSRNLASTSHCKIC 120
Query: 374 REAPEAIEHLLFHCTKV*RIWEL------SLVSWPGLQKFTDHFQGWWEQICSIRMLSIN 535
+ EH L CT +W L +L+S + W + +
Sbjct: 121 GAVDDTWEHSLLFCTMSKCVWALLDEDITNLISHLRISN-----PKHWITFMCCNIPQAD 175
Query: 536 QDRIEFTAYLL*SIWKTRNDFTFNAVMVSVAKIVERAR*EWQEFLSIH--EQKTSTRLVG 709
R+ T + +IW+ R V S I+ + +E I E K +
Sbjct: 176 GIRVLVTCW---AIWQARRKAIHEGVFQSPFSIMVTINRQIEELQMIRGMELKGGNQNQS 232
Query: 710 RNQLPL*QAPHHNDWMVGYETMRISAIFKKNIACGSYGLLTEDRHGITQQASAIFYEREV 889
+ + L +AP G + + A + + G+ G++ + G SA+
Sbjct: 233 KQKTRLWKAPDQ-----GKCKINVDAAVNRVGSKGAVGVVCRNDRGEFIAPSAMIIPNIT 287
Query: 890 SALTLSLRAIRDTQLRTYKLRWNKAILLSDEMDIVRHLQDTSPIFTDIFLLTNL------ 1051
TL A + K I+ SD ++IVR++ + P+ T + +L ++
Sbjct: 288 EPETLEGMACLEALALAEDCGIRKIIVASDCLNIVRNISE-MPLCTYVMILKDIQERAKS 346
Query: 1052 FQDCKFVLISKDANKGCCRLAQFALQ-SSSSETWNTSFPTWL 1174
F +F ++ N+ RL ++A W S P +L
Sbjct: 347 FDYVRFAHEGRECNREADRLVKYACSLEDGRHVWLGSPPVFL 388
>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 82.0 bits (201), Expect = 3e-13
Identities = 89/394 (22%), Positives = 154/394 (39%), Gaps = 19/394 (4%)
Frame = +2
Query: 2 DNGTIWNSDLIYKTFCKPDAEAILILPTSALGSQDKLHKIHSKIGAYTVKSTSTWLAKL- 178
++G W D+I F + + + I L D ++ G YTVKS L ++
Sbjct: 177 ESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQII 236
Query: 179 -RHQHPHQLESSSRLELTKKIWKRTWEMQIKGKIKHFRLRTYHLLLPTGHQLQLSEIHLD 355
+ P ++ S + +KIWK Q KI+HF + LP L + +
Sbjct: 237 NKRSSPQEVSEPSLNPIYQKIWKS----QTSPKIQHFLWKCLSNSLPVAGALAYRHLSKE 292
Query: 356 STCKICREAPEAIEHLLFHCTKV*RIWELSLVSWPGLQKFTDHFQGWWEQICSIRMLSIN 535
S C C E + HLLF CT W +S + P G W + + +
Sbjct: 293 SACIRCPSCKETVNHLLFKCTFARLTWAISSIPIP--------LGGEWADSIYVNLYWVF 344
Query: 536 ---------QDRIEFTAYLL*SIWKTRNDFTFNAVMVSVAKIVERAR*EWQEF-LSIHEQ 685
+ + +LL +WK RN+ F + +++ RA + +E+ + +
Sbjct: 345 NLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAE 404
Query: 686 KTSTR-LVGRNQLPL*QAPHHNDWMVGYETMRISAIFKKNIACGSYGLLTEDRHGITQQA 862
T+ V R+ + P H W+ + + + N CG G + + G +
Sbjct: 405 SCGTKPQVNRSSCGRWRPPPH-QWV---KCNTDATWNRDNERCG-IGWVLRNEKGEVKWM 459
Query: 863 SAIFYEREVSALTLSLRAIRDTQLRTYKLRWNKAILLSDEMDIVRHLQD------TSPIF 1024
A + S L L A+R L + ++N I SD ++ L + P
Sbjct: 460 GARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPSLKPTI 519
Query: 1025 TDIFLLTNLFQDCKFVLISKDANKGCCRLAQFAL 1126
D+ L + F + KFV I ++ N R+A+ +L
Sbjct: 520 QDLQRLLSQFTEVKFVFIPREGNTLAERVARESL 553
>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
Length = 1076
Score = 81.6 bits (200), Expect = 4e-13
Identities = 98/409 (23%), Positives = 152/409 (37%), Gaps = 26/409 (6%)
Frame = +2
Query: 17 WNSDLIYKTFCKPDAEAILI--LPTSALGSQDKLHKIHSKIGAYTVKSTSTWLAKLRHQH 190
WN L+ + DA +L LP + H H K G +TVKS L +
Sbjct: 664 WNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWH--HEKSGLFTVKSAYKLAWNLSGKG 721
Query: 191 PHQLESSSRLELTKKIWKRTWEMQIKGKIKHFRLRTYHLLLPTGHQLQLSEIHLDSTCKI 370
Q SS+ +KIW R W +++ K+K F + LPT + +I ++ TC +
Sbjct: 722 VVQSSSSTATSGERKIWSRVWNAKVQAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPV 781
Query: 371 CREAPEAIEHLLFHCTKV*RIWELSLVSW--PGLQKFTDHFQGWWEQICSIRMLSINQDR 544
C E H CTK + E W PG KF W I + +N+++
Sbjct: 782 CGTKGENSYHATVECTKARALREALRAVWHLPGEDKFLWTGPDW----LLILLDGVNEEQ 837
Query: 545 IEFTAYLL*SIWKTRNDFTFNAVMVSVAKIVERAR*EWQEFLSIHEQ-----KTSTRLVG 709
Y+L W RND S+A V ++E L + Q K +
Sbjct: 838 RTHIMYMLWRAWYLRNDLIHGDGRCSIAGSVSFLT-SYEEVLLPNRQMPDDIKGKKPMYS 896
Query: 710 RNQLPL*QAPHHND-WMV---GYETMRISAIFKKNIACGSYGLLTEDRHGITQQASAIFY 877
Q A + W+ G + + A F+ S G++ D G+ A+
Sbjct: 897 EGQKEKHMAEKQSSGWIAPPDGAAKINVDAGFRMETGEASAGIVIRDCRGLILLAACKTL 956
Query: 878 ----EREVSALTLSLRAIRDTQLRTYKLRW--NKAILLSDEMDIVRHLQ---DTSPIFTD 1030
E + SL IR L+W IL +D ++V L+ + ++
Sbjct: 957 HPCSSAEQAEALASLEGIR------CALQWIHMPVILETDNAEVVARLKTKHSSRSVWEG 1010
Query: 1031 IFLLTNL----FQDCKFVLISKDANKGCCRLAQFALQSSSSETWNTSFP 1165
+ + Q + I +D+NK LAQ AL S + W P
Sbjct: 1011 VIMEAKAAMQGLQAVEVAHIKRDSNKVAHTLAQMALSSGNCLEWRLCAP 1059
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 81.3 bits (199), Expect = 5e-13
Identities = 85/400 (21%), Positives = 156/400 (39%), Gaps = 10/400 (2%)
Frame = +2
Query: 5 NGTIWNSDLIYKTFCKPDAEAILILPTSALGSQDKLHKIHSKIGAYTVKSTSTWLAKLRH 184
+G WN +L+ F E IL L ++D+ +S+ G Y+VKS + ++ +
Sbjct: 975 DGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIIN 1034
Query: 185 Q--HPHQLESSSRLELTKKIWKRTWEMQIKGKIKHFRLRTYHLLLPTGHQLQLSEIHLDS 358
Q +P ++ S + ++IWK + + KI HF R + L L + +
Sbjct: 1035 QRNNPQEVLQPSLDPIFQQIWK----LDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREK 1090
Query: 359 TCKICREAPEAIEHLLFHCTKV*RIWELS-LVSWPGLQKFTDHFQGWWEQICSIRMLSIN 535
+C C E + HLLF C W +S L + PG + F+ + +
Sbjct: 1091 SCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKSQPEE 1150
Query: 536 QDRIEFTAYLL*SIWKTRNDFTFNAVMVSVAKIVERAR*EWQEFLSIHEQKTSTRLVGRN 715
D ++L +WK RND F + +++ +A + + + E + R+
Sbjct: 1151 SDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEPQPQVTSSTRD 1210
Query: 716 QLPL*QAPHHNDWMVGYETMRISAIFKKNIACGSYGLLTEDRHGITQQASAIFYEREVSA 895
+ Q P H G+ + K++ G + + G + S
Sbjct: 1211 RCVKWQPPSH-----GWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSV 1265
Query: 896 LTLSLRAIRDTQLRTYKLRWNKAILLSDEMDIVRHLQD------TSPIFTDIFLLTNLFQ 1057
L + A+R L + + + I SD +V +Q+ +P DI L F+
Sbjct: 1266 LETEVEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPSLAPRIQDIRNLLRHFE 1325
Query: 1058 DCKFVLISKDANKGCCRLAQFALQSSSSETWNTSF-PTWL 1174
+ KF ++ N R A+ +L + + S P W+
Sbjct: 1326 EVKFQFTRREGNNVADRTARESLSLMNYDPKMYSITPDWI 1365