BLASTX nr result

ID: Cephaelis21_contig00022407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022407
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...    68   7e-10
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
           gi|223536320|gb|EEF37970.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1744

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = +1

Query: 1   NPNYRFQGIEWII*YNLEL*FCDILTA*PLVGILVCERILDAVTSVMTAVDMPLEMLLLF 180
           NP YRF+ +  II               P V   VCE++L A TSV++ VD+PLE+LL F
Sbjct: 572 NPKYRFRVLNTII-------------VIPFVIFAVCEKVLGAATSVVSTVDVPLEVLLHF 618

Query: 181 ISCLPRDLTDLGGPLRFK 234
           +S LPR+ TD GGPLR K
Sbjct: 619 VSTLPREFTDYGGPLRVK 636


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
           predicted protein [Populus trichocarpa]
          Length = 1224

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/50 (52%), Positives = 37/50 (74%)
 Frame = +1

Query: 85  PLVGILVCERILDAVTSVMTAVDMPLEMLLLFISCLPRDLTDLGGPLRFK 234
           P   + VCE++L+A TS+++ +D+PLE+LL FI+ LPR  TD GG LR K
Sbjct: 65  PYYRLQVCEKVLEAATSLVSTLDVPLEILLHFIATLPRAFTDYGGSLRLK 114


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