BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022381
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              76   8e-21
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   66   5e-17
gb|AFB73912.1| polyprotein [Citrus sinensis]                           61   1e-15
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               62   4e-15
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               62   4e-15

>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 75.9 bits (185), Expect(2) = 8e-21
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = -3

Query: 139 CYNCGKRGHYKKDCWDLKQNSSPEGNVANISDDENVLVCEAAMTHE 2
           CYNCGK+GH KKDCW+L QNS+P+GNVA+ SDD + L CEA++  E
Sbjct: 228 CYNCGKKGHLKKDCWNLAQNSNPQGNVASTSDDGSALCCEASIARE 273



 Score = 49.3 bits (116), Expect(2) = 8e-21
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -1

Query: 333 LNFDDIVAAVLDEEKRRKNKEDRQIGSQQIEA 238
           L FDD+ AAVL+EE RRKNKEDRQ+  QQ EA
Sbjct: 168 LVFDDVAAAVLEEESRRKNKEDRQVNLQQAEA 199


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 66.2 bits (160), Expect(2) = 5e-17
 Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
 Frame = -3

Query: 229 TRERLIEHSPCGCGSQNHSXXXXXXXXXXKCYNCGKRGHYKKDCWDLKQN-------SSP 71
           TR R  E  P G  SQNH           KCYNCGKRGH KKDCW  K++       S+ 
Sbjct: 202 TRGRSTERGPSG--SQNHGRSTSRRKTNLKCYNCGKRGHLKKDCWSNKKSGEKSSEASTS 259

Query: 70  EGNVANISDDENVLVCEAAMT 8
           +G VA+ SDD  VL  EAA++
Sbjct: 260 QGCVASTSDDGEVLYSEAAVS 280



 Score = 46.2 bits (108), Expect(2) = 5e-17
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = -1

Query: 333 LNFDDIVAAVLDEEKRRKNKEDRQIGSQQIEA 238
           L+F+D+  A+L+EE RRKNKEDRQ  S+Q+EA
Sbjct: 167 LSFNDVAGAILEEESRRKNKEDRQDSSKQMEA 198


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 61.2 bits (147), Expect(2) = 1e-15
 Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
 Frame = -3

Query: 229 TRERLIEHSPCGCGSQNHSXXXXXXXXXXKCYNCGKRGHYKKDCWDLK--------QNSS 74
           TR R  E  P G  SQNH           KCYNCGK+GH KK+CW  +        ++S+
Sbjct: 202 TRGRSTERGPSG--SQNHGRSKSRSKKNVKCYNCGKKGHVKKECWSNQKRREGKEPESSN 259

Query: 73  PEGNVANISDDENVLVCEAAMTHE 2
            +G VA+ SDD  +L  EA +  E
Sbjct: 260 AQGCVASTSDDGEILYSEATIVSE 283



 Score = 46.6 bits (109), Expect(2) = 1e-15
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -1

Query: 333 LNFDDIVAAVLDEEKRRKNKEDRQIGSQQIEA 238
           L FDD+ A+VL+EE RRKNKE+RQ  SQQ EA
Sbjct: 167 LVFDDVAASVLNEESRRKNKENRQASSQQAEA 198


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect(2) = 4e-15
 Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
 Frame = -3

Query: 229 TRERLIEHSPCGCGSQNHSXXXXXXXXXXKCYNCGKRGHYKKDCWDLKQN-------SSP 71
           TR R  E  P G  SQNH           KCY CG +GH KK+CW++K+N       S+ 
Sbjct: 202 TRGRSTERGPSG--SQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTS 259

Query: 70  EGNVANISDDENVLVCEAA 14
           +G VA+ SDD  +L  EAA
Sbjct: 260 QGCVASTSDDGEILYSEAA 278



 Score = 43.9 bits (102), Expect(2) = 4e-15
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -1

Query: 333 LNFDDIVAAVLDEEKRRKNKEDRQIGSQQIEA 238
           L+FDD+  A+L+EE RRKNKE+R   S+Q EA
Sbjct: 167 LHFDDVAGAILEEESRRKNKEERSESSKQAEA 198


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect(2) = 4e-15
 Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
 Frame = -3

Query: 229 TRERLIEHSPCGCGSQNHSXXXXXXXXXXKCYNCGKRGHYKKDCWDLKQN-------SSP 71
           TR R  E  P G  SQNH           KCY CG +GH KK+CW++K+N       S+ 
Sbjct: 202 TRGRSTERGPSG--SQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTS 259

Query: 70  EGNVANISDDENVLVCEAA 14
           +G VA+ SDD  +L  EAA
Sbjct: 260 QGCVASTSDDGEILYSEAA 278



 Score = 43.9 bits (102), Expect(2) = 4e-15
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -1

Query: 333 LNFDDIVAAVLDEEKRRKNKEDRQIGSQQIEA 238
           L+FDD+  A+L+EE RRKNKE+R   S+Q EA
Sbjct: 167 LHFDDVAGAILEEESRRKNKEERSESSKQAEA 198