BLASTX nr result

ID: Cephaelis21_contig00022364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022364
         (1700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...   254   6e-65
ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containi...   227   8e-57
ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containi...   227   8e-57
ref|XP_002517094.1| pentatricopeptide repeat-containing protein,...   227   8e-57
ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containi...   221   5e-55

>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  254 bits (648), Expect = 6e-65
 Identities = 136/316 (43%), Positives = 196/316 (62%), Gaps = 2/316 (0%)
 Frame = -3

Query: 945 YFLSNAFGTVVGSLQVSDNPHVTESPENPDGLK-SLSLRSTGFEKFNYSDDFWSPSLAKW 769
           Y   N F T  GS      P   ESPE PD +K S +    G +     DDF  P LA W
Sbjct: 14  YLSLNPFCTTTGS------PTTAESPELPDWVKFSQNNNPAGSDS---DDDFVIPKLAYW 64

Query: 768 IEDYKV-HFPEVDLGSKAGNMPDYEVDQISDILNYQFESLHAVVKELSDCTVEVTDNLVE 592
            E+ K  H  +VD G       D ++D+IS++L ++  S  AVV+ L  C V V+++LVE
Sbjct: 65  AENQKHDHRSKVD-GYVLKETIDSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVE 123

Query: 591 QILKRFSFDWIPCFGFFKWATSQRGFKFSPELYTLMLDNMGKSRKFDLMFEILEEMKQLD 412
           Q+LKRFS DWIP FGFFKWA +Q G++ S   Y  M+D +GK +KFDLM+E++EEM +L 
Sbjct: 124 QVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLG 183

Query: 411 VSITRLTMRKVMRRLSKAGKLDDAINVCRNLEQFGFPNDAEAMNMLLEAVANNRGITHAE 232
             ++  TM KVMRRL++A +  DAI   R +E+FG   D  AMN L++A+     + HA 
Sbjct: 184 GYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHAN 243

Query: 231 KVYLELKGFLSPDAITFNILVHGWCQAKKIEKAKEIVSEMKRHGFDPDTVTCNCFIEAHC 52
            V++E K  +  +  TFN+L+HGWC+A+K++ A + ++EMK HGF PD ++    +EA+C
Sbjct: 244 DVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYC 303

Query: 51  HKKDFHEVDAMLKYME 4
            +KDF +V+++L  ME
Sbjct: 304 REKDFRKVNSVLNEME 319



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 37/170 (21%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
 Frame = -3

Query: 507 SPELYTLMLDNMGKSRKFDLMFEILEEMKQLDVSITRLTMRKVMRRLSKAGKLDDAINVC 328
           +P  + +++    K+RK D   + + EMK+       ++   ++    +        +V 
Sbjct: 256 NPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVL 315

Query: 327 RNLEQFGFPNDAEAMNMLLEAVANNRGITHAEKVYLELKGFLS-PDAITFNILVHGWCQA 151
             +E+ G P +     +++ A+   + I+ A +VY ++KG    PD   ++ L++   +A
Sbjct: 316 NEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKA 375

Query: 150 KKIEKAKEIVSEMKRHGFDPDTVTCNCFIEAHC-HKKDFHEVDAMLKYME 4
            +++ A+++  +M + G  PD +T N  I A C H ++   +  +LK  E
Sbjct: 376 GRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEE 425


>ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 614

 Score =  227 bits (578), Expect = 8e-57
 Identities = 121/307 (39%), Positives = 188/307 (61%), Gaps = 1/307 (0%)
 Frame = -3

Query: 921 TVVGSLQVSDNPHVTESPENPDGLKSLSLR-STGFEKFNYSDDFWSPSLAKWIEDYKVHF 745
           T+ GS +VS      ESP+ PD +K    + ST  E  +  D F  P LA W+E  K+  
Sbjct: 98  TITGSTEVS------ESPDLPDWIKFFDTKTSTHLE--SEDDVFVIPPLAHWLESQKLED 149

Query: 744 PEVDLGSKAGNMPDYEVDQISDILNYQFESLHAVVKELSDCTVEVTDNLVEQILKRFSFD 565
               +  K G   + EVD+IS +L  ++ S   V + L+     V++ LV Q+LKRF  D
Sbjct: 150 NNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHND 209

Query: 564 WIPCFGFFKWATSQRGFKFSPELYTLMLDNMGKSRKFDLMFEILEEMKQLDVSITRLTMR 385
           WI  +G FKWA  Q  ++ SPE Y  M+D +GK++ F LM+E+++EM  L  S++  TM 
Sbjct: 210 WIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMS 269

Query: 384 KVMRRLSKAGKLDDAINVCRNLEQFGFPNDAEAMNMLLEAVANNRGITHAEKVYLELKGF 205
           KV+RRL++AG+  +AI+  RN+E++G   D  AMN+L++A+     +  A  V+ ELK  
Sbjct: 270 KVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCS 329

Query: 204 LSPDAITFNILVHGWCQAKKIEKAKEIVSEMKRHGFDPDTVTCNCFIEAHCHKKDFHEVD 25
           +  +  +FN+L+HG+C+AKK+++A +I+ E+++ G +PD ++   FIEAHC +KDF  VD
Sbjct: 330 IPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVD 389

Query: 24  AMLKYME 4
            +L  ME
Sbjct: 390 KVLVQME 396


>ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  227 bits (578), Expect = 8e-57
 Identities = 121/307 (39%), Positives = 188/307 (61%), Gaps = 1/307 (0%)
 Frame = -3

Query: 921 TVVGSLQVSDNPHVTESPENPDGLKSLSLR-STGFEKFNYSDDFWSPSLAKWIEDYKVHF 745
           T+ GS +VS      ESP+ PD +K    + ST  E  +  D F  P LA W+E  K+  
Sbjct: 75  TITGSTEVS------ESPDLPDWIKFFDTKTSTHLE--SEDDVFVIPPLAHWLESQKLED 126

Query: 744 PEVDLGSKAGNMPDYEVDQISDILNYQFESLHAVVKELSDCTVEVTDNLVEQILKRFSFD 565
               +  K G   + EVD+IS +L  ++ S   V + L+     V++ LV Q+LKRF  D
Sbjct: 127 NNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHND 186

Query: 564 WIPCFGFFKWATSQRGFKFSPELYTLMLDNMGKSRKFDLMFEILEEMKQLDVSITRLTMR 385
           WI  +G FKWA  Q  ++ SPE Y  M+D +GK++ F LM+E+++EM  L  S++  TM 
Sbjct: 187 WIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMS 246

Query: 384 KVMRRLSKAGKLDDAINVCRNLEQFGFPNDAEAMNMLLEAVANNRGITHAEKVYLELKGF 205
           KV+RRL++AG+  +AI+  RN+E++G   D  AMN+L++A+     +  A  V+ ELK  
Sbjct: 247 KVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCS 306

Query: 204 LSPDAITFNILVHGWCQAKKIEKAKEIVSEMKRHGFDPDTVTCNCFIEAHCHKKDFHEVD 25
           +  +  +FN+L+HG+C+AKK+++A +I+ E+++ G +PD ++   FIEAHC +KDF  VD
Sbjct: 307 IPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVD 366

Query: 24  AMLKYME 4
            +L  ME
Sbjct: 367 KVLVQME 373


>ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543729|gb|EEF45257.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score =  227 bits (578), Expect = 8e-57
 Identities = 110/296 (37%), Positives = 181/296 (61%), Gaps = 1/296 (0%)
 Frame = -3

Query: 888 PHVTESPENPDGLKSLSLRSTGFEKFNYSD-DFWSPSLAKWIEDYKVHFPEVDLGSKAGN 712
           PH  +SP++P+    L       +K  + D DF  PSLA W+E + +   +        +
Sbjct: 37  PHSADSPDSPES-PDLPTWLHSNKKPEFPDGDFVIPSLADWVEHHNLGDIKEVGNHLLFH 95

Query: 711 MPDYEVDQISDILNYQFESLHAVVKELSDCTVEVTDNLVEQILKRFSFDWIPCFGFFKWA 532
               ++D++S+IL   +    +VV+ L+DC V  T+NL+ Q+L RF  DW+P  G F WA
Sbjct: 96  AQVSDIDRVSEILKKHYPCTDSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWA 155

Query: 531 TSQRGFKFSPELYTLMLDNMGKSRKFDLMFEILEEMKQLDVSITRLTMRKVMRRLSKAGK 352
             Q G+   P+LY LM+D +G+ +KF  M+E+++EM+ L+  ++ +TM+KVMRRL++AG 
Sbjct: 156 KHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGN 215

Query: 351 LDDAINVCRNLEQFGFPNDAEAMNMLLEAVANNRGITHAEKVYLELKGFLSPDAITFNIL 172
             DA+   R +E+ G   D EA+N+L++A+     + HA   ++E K  +  D  +FNIL
Sbjct: 216 FQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNIL 275

Query: 171 VHGWCQAKKIEKAKEIVSEMKRHGFDPDTVTCNCFIEAHCHKKDFHEVDAMLKYME 4
           +HG+C+A+K++ A++I+ EM + GF P+ V+  CFIE +C  KDF  V+A+   M+
Sbjct: 276 LHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQ 331


>ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 543

 Score =  221 bits (563), Expect = 5e-55
 Identities = 117/294 (39%), Positives = 180/294 (61%), Gaps = 2/294 (0%)
 Frame = -3

Query: 882 VTESPENPDGLKSLSLRSTGFEKFNYSDDFWSPSLAKWIEDYK-VHFPEVDLGSKAGNMP 706
           + ESPE P  LK     +      +  D+F  PSLA W++ +  +  P+V   S   +  
Sbjct: 34  MAESPELPPWLKFSDTPTP--PDADSDDNFVIPSLAHWVDTHMLITKPKVLTQSPKQDNL 91

Query: 705 DYEVDQISDILNYQFESLHAVVKELSDCTVEVTDNLVEQILKRFSFDWIPCFGFFKWATS 526
           D E+D I+ +L  ++ S       L   + + +  LV Q+L RFS DW+P  GFFKWA S
Sbjct: 92  D-ELDAITKVLKKRYPSPELAALALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKS 150

Query: 525 QRGFKFSPELYTLMLDNMGKSRKFDLMFEILEEMKQLDVS-ITRLTMRKVMRRLSKAGKL 349
           Q G++ SPEL  LM+D +GK + FD M +++EEM +L+   +T  TM KV+RRL+KA K 
Sbjct: 151 QTGYRHSPELCNLMVDILGKCKSFDPMSDLVEEMAKLEQGYVTLETMAKVIRRLAKARKH 210

Query: 348 DDAINVCRNLEQFGFPNDAEAMNMLLEAVANNRGITHAEKVYLELKGFLSPDAITFNILV 169
           +DAI   R +++FG   D  A+N+L++A+     + HA KV LE KG +   + +FN+L+
Sbjct: 211 EDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGLIPLSSHSFNVLM 270

Query: 168 HGWCQAKKIEKAKEIVSEMKRHGFDPDTVTCNCFIEAHCHKKDFHEVDAMLKYM 7
           HGWC+A+K + A++ + +MK  GF+PD  +   FIEA+CH++DF +VD +L+ M
Sbjct: 271 HGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEM 324


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