BLASTX nr result

ID: Cephaelis21_contig00022307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022307
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group] g...    62   5e-08
ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog...    62   5e-08
emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group] gi|116310...    62   5e-08
gb|AAO72584.1| putative RNA-binding domain protein [Oryza sativa...    62   5e-08
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...    62   6e-08

>ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group]
           gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza
           sativa Japonica Group] gi|113564771|dbj|BAF15114.1|
           Os04g0496400 [Oryza sativa Japonica Group]
           gi|125590877|gb|EAZ31227.1| hypothetical protein
           OsJ_15326 [Oryza sativa Japonica Group]
          Length = 476

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
 Frame = -3

Query: 169 VYKWDRVLRNWVPQEKKSERTENYAVDDMTFVEEEEIFPA--------LGANVVSGEEKV 14
           VYKWDRVLR WVPQ+    + +NY V+DMTF  EEE+F A        L  N VS E ++
Sbjct: 133 VYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTTLEENNVSAEIEI 192

Query: 13  EE 8
           +E
Sbjct: 193 KE 194


>ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
          Length = 503

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = -3

Query: 169 VYKWDRVLRNWVPQEKKSERTENYAVDDMTFVEEEEIFPALGANVVSGEEKVEET 5
           VYKWDR LR WVPQE  +  TE Y V +MTF+EEEE+FP +   +    EK E++
Sbjct: 154 VYKWDRNLRAWVPQEHPTGSTEPYGVQEMTFLEEEEVFPTI--PISDASEKFEDS 206


>emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group] gi|116310709|emb|CAH67506.1|
           OSIGBa0092E01.1 [Oryza sativa Indica Group]
           gi|125548880|gb|EAY94702.1| hypothetical protein
           OsI_16479 [Oryza sativa Indica Group]
          Length = 476

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
 Frame = -3

Query: 169 VYKWDRVLRNWVPQEKKSERTENYAVDDMTFVEEEEIFPA--------LGANVVSGEEKV 14
           VYKWDRVLR WVPQ+    + +NY V+DMTF  EEE+F A        L  N VS E ++
Sbjct: 133 VYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTTLEENNVSAEIEI 192

Query: 13  EE 8
           +E
Sbjct: 193 KE 194


>gb|AAO72584.1| putative RNA-binding domain protein [Oryza sativa Japonica Group]
          Length = 286

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
 Frame = -3

Query: 169 VYKWDRVLRNWVPQEKKSERTENYAVDDMTFVEEEEIFPA--------LGANVVSGEEKV 14
           VYKWDRVLR WVPQ+    + +NY V+DMTF  EEE+F A        L  N VS E ++
Sbjct: 133 VYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTTLEENNVSAEIEI 192

Query: 13  EE 8
           +E
Sbjct: 193 KE 194


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
           communis] gi|223547951|gb|EEF49443.1| Splicing factor
           U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/96 (33%), Positives = 47/96 (48%)
 Frame = -3

Query: 301 DEFEKWKRXXXXXXXXXXXXXXXXXEKPSXXXXXXXXXXXXXXTVYKWDRVLRNWVPQEK 122
           DEFEKW+R                  +P               T YKWDR LR WVPQ+ 
Sbjct: 126 DEFEKWQREISEAEAEAD--------RPQSPPEGEEEFTDDDGTTYKWDRGLRAWVPQDN 177

Query: 121 KSERTENYAVDDMTFVEEEEIFPALGANVVSGEEKV 14
            S  T  Y +++MTF++EE++FP +  N  + +E++
Sbjct: 178 TSSVTGQYGLEEMTFLQEEDVFPTVDINNAAFKEEI 213


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