BLASTX nr result

ID: Cephaelis21_contig00022280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022280
         (1997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabac...   145   5e-32
ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-27
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...   128   5e-27
ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica...   117   1e-23

>ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabacum]
           gi|56806583|dbj|BAD83484.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 122

 Score =  145 bits (365), Expect = 5e-32
 Identities = 78/101 (77%), Positives = 84/101 (83%), Gaps = 5/101 (4%)
 Frame = +1

Query: 571 LVWGLSGPDRSFS*LRKG--SKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKG 744
           ++WGLSGP RSFS LR+G  SKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKG
Sbjct: 10  VLWGLSGPSRSFSTLRRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKG 69

Query: 745 QGFFRINSGRVS*DYAG---QTKVEGPFNSLRGIAAPSPNA 858
           + FF +  G     YAG   QTKVEGPF+SLRGIAAPSP A
Sbjct: 70  RAFFVVIVGGSHEIYAGRRNQTKVEGPFDSLRGIAAPSPGA 110


>ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|222869002|gb|EEF06133.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  127 bits (318), Expect(2) = 2e-27
 Identities = 63/74 (85%), Positives = 68/74 (91%)
 Frame = -1

Query: 347 KRLASIRIMLGVLSLLPDLERYYKSSVPDFIAAAIWFTGTTKKSHAYVTVIDGLIILDHE 168
           +R A IRI+LG LSLLPDL+RYY+SSVPD IAAAIWFTGTTKKSHAYVTVIDGLIILDHE
Sbjct: 21  QRSAPIRIILGGLSLLPDLKRYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIILDHE 80

Query: 167 DPSRASGFHSHHHI 126
           DP  ASGFHSHHH+
Sbjct: 81  DPG-ASGFHSHHHM 93



 Score = 23.9 bits (50), Expect(2) = 2e-27
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 141 FSSSYYISMKKILVLCHKNLESVS 70
           F S +++++  + VL HKNLESVS
Sbjct: 87  FHSHHHMTVN-LFVLRHKNLESVS 109


>ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|222869001|gb|EEF06132.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  129 bits (325), Expect = 2e-27
 Identities = 63/74 (85%), Positives = 66/74 (89%)
 Frame = -1

Query: 347 KRLASIRIMLGVLSLLPDLERYYKSSVPDFIAAAIWFTGTTKKSHAYVTVIDGLIILDHE 168
           +R A IRI LG LSLLPDLERYY+SSV D IAAA+WFT TTKKSHAYVTVIDGLIILDHE
Sbjct: 21  QRSAPIRITLGGLSLLPDLERYYESSVSDSIAAAVWFTSTTKKSHAYVTVIDGLIILDHE 80

Query: 167 DPSRASGFHSHHHI 126
           DP RASGFHSHHHI
Sbjct: 81  DPGRASGFHSHHHI 94


>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  128 bits (322), Expect = 5e-27
 Identities = 63/71 (88%), Positives = 64/71 (90%)
 Frame = -1

Query: 344 RLASIRIMLGVLSLLPDLERYYKSSVPDFIAAAIWFTGTTKKSHAYVTVIDGLIILDHED 165
           R A IRI LG LSLLPDLERYY+SSVPD IAAAIWFTGTTKKSHAYVTV DGLIILDHED
Sbjct: 181 RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTDGLIILDHED 240

Query: 164 PSRASGFHSHH 132
           P RASGFHSHH
Sbjct: 241 PGRASGFHSHH 251



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 48/88 (54%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
 Frame = -3

Query: 639 VH*FR-----PLSQLRKRSIGARKPPNQERKRKPFDSLPILS*INKARPRALGRSAGSFS 475
           VH FR     P SQLR RS GARK   + R           S +NKARPRALGRSAGSF 
Sbjct: 8   VHLFRRGRLLPPSQLRIRSRGARKKAPKPRTETEAFLFTPHSLLNKARPRALGRSAGSFL 67

Query: 474 VVLFPPRERRG--KRYAQRAEDPLRVCI 397
            +LF  R  +   KRYAQRAEDPLRV +
Sbjct: 68  SLLFCFRHEKDARKRYAQRAEDPLRVSV 95


>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477313|gb|AES58516.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 346

 Score =  117 bits (292), Expect = 1e-23
 Identities = 68/97 (70%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   ANNSNAFGLFFEQESQPYLIFTMIRTPSSYGRARGSFS*IYNMMMRMETRSTTGVLVVQD 182
           ANNSNAFGLFFEQESQ YL FTMIRTPSSY                 E R T     VQD
Sbjct: 271 ANNSNAFGLFFEQESQRYLTFTMIRTPSSY-----------------EARPTG----VQD 309

Query: 183 NQTINNS-NVSMRLFGSTGEPDGRGDEIWDGGLVVSL 290
           NQTI+NS NVSMRLFGSTGEPDGRGD IWDGGLVVSL
Sbjct: 310 NQTISNSSNVSMRLFGSTGEPDGRGDGIWDGGLVVSL 346


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