BLASTX nr result

ID: Cephaelis21_contig00022267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022267
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    88   8e-16
ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                          81   8e-14
ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AE...    80   1e-13

>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/90 (48%), Positives = 55/90 (61%)
 Frame = +1

Query: 7   NNLDDALGFYDQMVRMWPLPKVIYFNQLLGRLAKMNHYAPVFSLHRNMCFKGIPVDECTL 186
           +N DDAL +++QMV M P P +  FNQLL  L +M HY  V S++R M F G+     TL
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 187 TTIINCYCLEGRVDLGFSLLGAFFKRGLVP 276
           T +INC C    V LGFS+LG  FK G  P
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKP 172


>ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|222853579|gb|EEE91126.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/89 (44%), Positives = 55/89 (61%)
 Frame = +1

Query: 10  NLDDALGFYDQMVRMWPLPKVIYFNQLLGRLAKMNHYAPVFSLHRNMCFKGIPVDECTLT 189
           NLDDAL  +++M+   P P +I FN+LL  + +M  Y  V SL + M F+GI  + CTL+
Sbjct: 20  NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79

Query: 190 TIINCYCLEGRVDLGFSLLGAFFKRGLVP 276
            +INC+C    VD GFS+ G   KRG  P
Sbjct: 80  ILINCFCFLHHVDYGFSVFGKTLKRGFKP 108


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/90 (43%), Positives = 55/90 (61%)
 Frame = +1

Query: 1   KVNNLDDALGFYDQMVRMWPLPKVIYFNQLLGRLAKMNHYAPVFSLHRNMCFKGIPVDEC 180
           +V+ LDDA+  + +MVRM PLP VI F++L   +  M HY+ V SL R M   GIP+ + 
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 181 TLTTIINCYCLEGRVDLGFSLLGAFFKRGL 270
            L  + N YCL  R+D  FS+L  + K G+
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGI 128


>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/85 (42%), Positives = 51/85 (60%)
 Frame = +1

Query: 13  LDDALGFYDQMVRMWPLPKVIYFNQLLGRLAKMNHYAPVFSLHRNMCFKGIPVDECTLTT 192
           +DDA+  + +++ M PLP V+ FN +LG + KM HY    SL + M  +GI     TL+ 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 193 IINCYCLEGRVDLGFSLLGAFFKRG 267
           +INCYC  G +   FS+LG   KRG
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRG 143


>ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AES76066.1| CCP [Medicago
           truncatula]
          Length = 556

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/90 (42%), Positives = 52/90 (57%)
 Frame = +1

Query: 7   NNLDDALGFYDQMVRMWPLPKVIYFNQLLGRLAKMNHYAPVFSLHRNMCFKGIPVDECTL 186
           N +DDA+  ++ ++ M PLP VI FN ++G + KM H     SL + M FKG+     TL
Sbjct: 63  NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122

Query: 187 TTIINCYCLEGRVDLGFSLLGAFFKRGLVP 276
           +  INCYC  G +   FS+LG   KRG  P
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQP 152


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