BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022259
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    82   1e-13
gb|ABI34321.1| RNase H family protein [Solanum demissum]               68   2e-09
gb|ABD28646.1| Ribonuclease H [Medicago truncatula]                    61   2e-07
gb|ABD32321.2| Ribonuclease H [Medicago truncatula]                    59   1e-06
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
 Frame = +1

Query: 127  LNVDGCSSLHGSMATAGGILRNSNGHTLLAFSVFLGSGSSICAEAKAMFLGLAFCDALYL 306
            LN DG S ++G     GGILRN+ G  ++AF++ LG G+S  AEA +M  G+  C    +
Sbjct: 1002 LNTDG-SCVNGRCG-GGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRGV 1059

Query: 307  KNVEAQSDSKLLLEMLEDKIQTPWTLLPLIKKISR-YKHVVSNLQHCLREGNTVADALAC 483
              +  ++DS LL + + +    PW +   +KKI +  +     + HCLRE N  AD LA 
Sbjct: 1060 NMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLAS 1119

Query: 484  EALHHRSSILYSQVQQLSSHVKVKIRFDAFHFPNFR 591
             +L    + ++     L S VK  +  D  + P FR
Sbjct: 1120 ISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
 Frame = +1

Query: 34   SWTNFLATLEGSKCFISSQPIYW-TANAHKLTLNVDGCSSLHGSMATAGGILRNSNGHTL 210
            SW + L  +E  + +   + ++W T N + + +N DG  S     A  G I+R+     +
Sbjct: 725  SWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDG--SFSSGNAGLGWIVRDHTRRMI 782

Query: 211  LAFSVFLGSGSSICAEAKAMFLGLAFCDALYLKNVEAQSDSKLLLEMLEDKIQTPWTLLP 390
            +AFS+     S+  AEA A   G+ +C      N   + DSKL+++M+ +   T   +  
Sbjct: 783  MAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKG 842

Query: 391  LIKKISRYKHVVS-NLQHCLREGNTVADALACEALHHRSSILYSQVQQLSSHVKVKIRFD 567
            +++ I +    ++  + HC RE N VADALA  A+    + +Y   + +        + D
Sbjct: 843  VVEDIIQVVAKMNCEVNHCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLD 902

Query: 568  AFHFPNFRFK 597
                P+ R +
Sbjct: 903  KMQMPSIRIR 912


>gb|ABD28646.1| Ribonuclease H [Medicago truncatula]
          Length = 208

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
 Frame = +1

Query: 52  ATLEGSKCFISSQPIYWTANAHKL-TLNVDGCSSLHGSMATAGGILRNSNGHTLLAFSVF 228
           ++ + S      + + W +N H    LNVDG  S   + A  GGI+RNS G  L  FS F
Sbjct: 27  SSFQNSSATPHDRMVRWNSNNHLCHILNVDGSCSGIPTRAGYGGIIRNSAGLYLSCFSGF 86

Query: 229 LGSGSSI-CAEAKAMFLGLAFCDALYLKNVEAQSDSKLLLEMLEDKIQTPWTLLPLIKKI 405
           +   + I  AE  A+  G +    + +  +   SDS L + ++  +         LI+ I
Sbjct: 87  IADSTDILLAELTAIHRGFSIASDMGVNEMACYSDSLLSINLITGQASKYHAYAVLIQDI 146

Query: 406 SRYKHVVS----NLQHCLREGNTVADALA 480
              K ++S    ++QHCLREGN  AD +A
Sbjct: 147 ---KDLLSSHNFSIQHCLREGNQCADFMA 172


>gb|ABD32321.2| Ribonuclease H [Medicago truncatula]
          Length = 220

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
 Frame = +1

Query: 121 LTLNVDGCSSLHGSMATAGGILRNSNGHTLLAFSVFLGSGSSICAEAKAMFLGLAFCDAL 300
           + LN DG     G +A  GG+ R+ +G  +  ++  +G+  ++ AE   ++LGL      
Sbjct: 60  IKLNSDGACKDMGVIAGCGGLFRDLDGRWIKGYTKKIGACDALHAEMWGLYLGLDMAWRE 119

Query: 301 YLKNVEAQSDSKLLLEMLEDKIQTPWTLLPLIKKISRYKHVVSNLQ--HCLREGNTVADA 474
           +  ++  +SDSK+L++M+ D  +    +  L+ +I +      N+Q  H  REGN  AD 
Sbjct: 120 HYSHLIVESDSKILIDMISDNFKFNGNIPVLVYRIRKLLKTSWNVQLNHTWREGNRSADW 179

Query: 475 LA 480
           LA
Sbjct: 180 LA 181


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
 Frame = +1

Query: 118 KLTLNVDGCSSLHGSMATAGGILRNSNGHTLLAFSVFLGSGSSICAEAKAMFLGLAFCDA 297
           ++ LNVDGCS  +  +A AGG++R+  G  +  F+  +G  SS+ AE  A+++GL     
Sbjct: 83  RIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWD 142

Query: 298 LYLKNVEAQSDSKLLLEMLED---KIQTPWTLLPLIKKISRYKHVVSNLQHCLREGNTVA 468
              + V+ +SDSK+++ ++     ++   + ++  IK +      V+   H  RE N VA
Sbjct: 143 RGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTT-YHVYREANCVA 201

Query: 469 DALA 480
           D LA
Sbjct: 202 DWLA 205