BLASTX nr result

ID: Cephaelis21_contig00022148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022148
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299867.1| GRAS family transcription factor [Populus tr...    64   2e-08
ref|XP_002533753.1| transcription factor, putative [Ricinus comm...    62   1e-07
ref|XP_002314172.1| GRAS family transcription factor [Populus tr...    61   2e-07
dbj|BAJ34044.1| unnamed protein product [Thellungiella halophila]      59   1e-06
gb|AFH54537.1| GRAS family protein, partial [Dimocarpus longan]        58   1e-06

>ref|XP_002299867.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222847125|gb|EEE84672.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 757

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
 Frame = -2

Query: 375 EIVVPGYEEYHSLLNGFKISDQSSGFI---FLITWSWPWKLASSSWIPE---VESAYSDP 214
           EIV P   +YH++ NGFK  D     +    ++    P  L+S + I E    +   S+ 
Sbjct: 19  EIVFPDSNQYHNVSNGFKFEDLDFDCVENPLVLPDPDPGALSSITAIDEDSPSDDNDSEN 78

Query: 213 VL*HLCQILLEENVDEKPSTLHDPLALQAAEKSFYDV 103
           +L ++ Q+L+EE+++EKP   HDPLALQAAE+S YD+
Sbjct: 79  LLKYINQMLMEEDMEEKPCMFHDPLALQAAERSLYDI 115


>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
           gi|223526341|gb|EEF28640.1| transcription factor,
           putative [Ricinus communis]
          Length = 764

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
 Frame = -2

Query: 375 EIVVPGYEEYHSLLNGFKISDQSSGFIF-------LITWSWPWKLASSSWI------PEV 235
           EI  P   +Y +  NG+K +D +    F       ++  S P + A SS        P  
Sbjct: 18  EIDFPDLHQYPTFTNGYKSNDPTFDIDFNFVDTSLVLLDSDPSRSAPSSVATMEGDSPSD 77

Query: 234 ESAYSDPVL*HLCQILLEENVDEKPSTLHDPLALQAAEKSFYDV 103
           ++ +S+ VL ++ Q+L+EE++++KP   HDPLALQAAE+S YDV
Sbjct: 78  DNDFSETVLNYISQMLMEEDMEQKPCMFHDPLALQAAERSLYDV 121


>ref|XP_002314172.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850580|gb|EEE88127.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 762

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
 Frame = -2

Query: 375 EIVVPGYEEYHSLLNGFKISDQSSGFI---FLITWSWPWKLASSSWIPEVESAYSDP--- 214
           EIV P   +Y ++ NGFKI D     +    ++    P   A SS       + SD    
Sbjct: 19  EIVFPVSNQYQNVTNGFKIEDLDLDHLENPLVLPDPDPGNSALSSITSMDGDSPSDDNDS 78

Query: 213 --VL*HLCQILLEENVDEKPSTLHDPLALQAAEKSFYDV 103
             +L ++ Q+L+EEN++EKP   HDPLALQAAE+S YD+
Sbjct: 79  ENLLKYISQMLMEENMEEKPCMFHDPLALQAAERSLYDI 117


>dbj|BAJ34044.1| unnamed protein product [Thellungiella halophila]
          Length = 772

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
 Frame = -2

Query: 366 VPGYEEYHSLLNGFKISDQSSGFIFL-----ITWSWPWKLASSSWI-----PEVESAYSD 217
           +PG  +   L NGF + D    F  L     ++ ++P     S+       P  ++ +SD
Sbjct: 24  LPGSNQTLGLANGFYLDDPLLNFASLDHSSALSETYPHNSNKSAPADPLSSPSDDADFSD 83

Query: 216 PVL*HLCQILLEENVDEKPSTLHDPLALQAAEKSFYDV---*YPVPGSILH 73
            VL ++ Q+L+EE+++EKP   HD LALQAAEKS Y+     YP   S+ H
Sbjct: 84  SVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKYPSSSSMDH 134


>gb|AFH54537.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 288

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
 Frame = -2

Query: 375 EIVVPGYEEYHSLLNGFKISDQSSGFIF----LITWSWP--WKLASSSWIPEVESA---- 226
           + V P   EY  + N FK SD +    F    L+T      +   S S  PE ES+    
Sbjct: 19  DTVFPNSNEYLDVANEFKFSDSNLDTSFVDDLLVTPERDSGFSAQSFSLSPEGESSSPSD 78

Query: 225 ---YSDPVL*HLCQILLEENVDEKPSTLHDPLALQAAEKSFYDV 103
              +S+ VL ++ Q+L+EE+++EKP   HDPLALQA E+S Y+V
Sbjct: 79  DNDFSETVLNYINQMLMEEDMEEKPCMFHDPLALQAKEQSLYEV 122


Top