BLASTX nr result

ID: Cephaelis21_contig00022129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022129
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   146   3e-33
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   146   3e-33
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              142   5e-32
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   142   5e-32
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   141   1e-31

>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  146 bits (369), Expect = 3e-33
 Identities = 77/130 (59%), Positives = 96/130 (73%), Gaps = 3/130 (2%)
 Frame = -1

Query: 691 ELSGRIIRVELAKRFKKXXXXXXXXXXXXXXPHVLYASNLSWKVRSSNLREFFSSN-NPV 515
           E+SGR+I+VE AKR KK               + LY SNL+WKVRS+NLR+FFS N NP+
Sbjct: 158 EISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPI 217

Query: 514 SSRVVFES--GRSAGYGFVSFATKEQAEAAISSLEGKELLGRPIRLKFSVRNADISETKA 341
           ++RVVF+S  GRSAGYGFVSFAT+E+A+ A+SSLEGKEL+GRP+RLKFS RN + +ET  
Sbjct: 218 AARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSERNVNEAETPK 277

Query: 340 EGTSEEQPGE 311
           E   E QP E
Sbjct: 278 EDIVESQPEE 287


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  146 bits (369), Expect = 3e-33
 Identities = 77/130 (59%), Positives = 96/130 (73%), Gaps = 3/130 (2%)
 Frame = -1

Query: 691 ELSGRIIRVELAKRFKKXXXXXXXXXXXXXXPHVLYASNLSWKVRSSNLREFFSSN-NPV 515
           E+SGR+I+VE AKR KK               + LY SNL+WKVRS+NLR+FFS N NP+
Sbjct: 152 EISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPI 211

Query: 514 SSRVVFES--GRSAGYGFVSFATKEQAEAAISSLEGKELLGRPIRLKFSVRNADISETKA 341
           ++RVVF+S  GRSAGYGFVSFAT+E+A+ A+SSLEGKEL+GRP+RLKFS RN + +ET  
Sbjct: 212 AARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSERNVNEAETPK 271

Query: 340 EGTSEEQPGE 311
           E   E QP E
Sbjct: 272 EDIVESQPEE 281


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  142 bits (359), Expect = 5e-32
 Identities = 86/135 (63%), Positives = 97/135 (71%), Gaps = 8/135 (5%)
 Frame = -1

Query: 691 ELSGRIIRVELAKRFKKXXXXXXXXXXXXXXP---HVLYASNLSWKVRSSNLREFFSSN- 524
           ELSGRIIRVE AKRFKK                  H LY SNL+WKVRS++LREFFSSN 
Sbjct: 123 ELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNF 182

Query: 523 NPVSSRVVFES--GRSAGYGFVSFATKEQAEAAISSLEGKELLGRPIRLKFSVRNADIS- 353
           NPVS RVVF+S  GRS GYGF SFATKE+AEAAIS+L+GKEL+GRP+ LKFSV+  D S 
Sbjct: 183 NPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESG 242

Query: 352 ETKAEG-TSEEQPGE 311
           + K EG  SE QP E
Sbjct: 243 DEKEEGDISEGQPEE 257


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  142 bits (359), Expect = 5e-32
 Identities = 86/135 (63%), Positives = 97/135 (71%), Gaps = 8/135 (5%)
 Frame = -1

Query: 691 ELSGRIIRVELAKRFKKXXXXXXXXXXXXXXP---HVLYASNLSWKVRSSNLREFFSSN- 524
           ELSGRIIRVE AKRFKK                  H LY SNL+WKVRS++LREFFSSN 
Sbjct: 153 ELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNF 212

Query: 523 NPVSSRVVFES--GRSAGYGFVSFATKEQAEAAISSLEGKELLGRPIRLKFSVRNADIS- 353
           NPVS RVVF+S  GRS GYGF SFATKE+AEAAIS+L+GKEL+GRP+ LKFSV+  D S 
Sbjct: 213 NPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESG 272

Query: 352 ETKAEG-TSEEQPGE 311
           + K EG  SE QP E
Sbjct: 273 DEKEEGDISEGQPEE 287


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  141 bits (355), Expect = 1e-31
 Identities = 78/131 (59%), Positives = 97/131 (74%), Gaps = 3/131 (2%)
 Frame = -1

Query: 691 ELSGRIIRVELAKRFKKXXXXXXXXXXXXXXPHVLYASNLSWKVRSSNLREFFSSN-NPV 515
           E+SGRIIRVE AKR K                H +Y SNL+WKVRS++LREFFS+N +PV
Sbjct: 147 EVSGRIIRVEFAKRLKPPSPPSPTGTSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPV 206

Query: 514 SSRVVFES--GRSAGYGFVSFATKEQAEAAISSLEGKELLGRPIRLKFSVRNADISETKA 341
           SSRVVF+S  GRS+GYGFVSFAT+E+AEAAIS+L+GKEL+GRP+RLKFS R  D  E+++
Sbjct: 207 SSRVVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRLKFSDRKTD--ESES 264

Query: 340 EGTSEEQPGEQ 308
           E   EE   +Q
Sbjct: 265 ENQEEENVEDQ 275


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