BLASTX nr result

ID: Cephaelis21_contig00022042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022042
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78361.1| hypothetical protein VITISV_023417 [Vitis vinifera]    61   8e-08
ref|XP_002264144.1| PREDICTED: nicastrin [Vitis vinifera] gi|296...    60   1e-07
ref|XP_002305230.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_003553007.1| PREDICTED: nicastrin-like [Glycine max]            58   9e-07
ref|XP_003538387.1| PREDICTED: nicastrin-like [Glycine max]            57   2e-06

>emb|CAN78361.1| hypothetical protein VITISV_023417 [Vitis vinifera]
          Length = 258

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 23/75 (30%)
 Frame = +2

Query: 194 KSFESVPDLEKS-----------------------NPGHGKVAAPVVKFKNVNELAEPSA 304
           +S ESVPDLEKS                       NPG  KV AP+V+FKNVN LA+ SA
Sbjct: 28  RSLESVPDLEKSMYMVVDGYPCVRLLNLSGEIGCSNPGREKVVAPIVRFKNVNVLAQSSA 87

Query: 305 VLVSMDEFQSLSSRD 349
           +LVS+DE QS  +R+
Sbjct: 88  ILVSLDEIQSFFTRE 102


>ref|XP_002264144.1| PREDICTED: nicastrin [Vitis vinifera] gi|296087098|emb|CBI33472.3|
           unnamed protein product [Vitis vinifera]
          Length = 671

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 23/74 (31%)
 Frame = +2

Query: 194 KSFESVPDLEKS-----------------------NPGHGKVAAPVVKFKNVNELAEPSA 304
           +S ESVPDLEKS                       NPG  KV AP+V+FKNVN LA+ SA
Sbjct: 28  RSLESVPDLEKSMYMVVDGYPCVRLLNLSGEIGCSNPGREKVVAPIVRFKNVNVLAQSSA 87

Query: 305 VLVSMDEFQSLSSR 346
           +LVS+DE QS  +R
Sbjct: 88  ILVSLDEIQSFFTR 101


>ref|XP_002305230.1| predicted protein [Populus trichocarpa] gi|222848194|gb|EEE85741.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +2

Query: 227 SNPGHGKVAAPVVKFKNVNELAEPSAVLVSMDEFQSLSSR 346
           SNPG  KV APVV++KNVNE+++PSAVLVS+DEF  L  R
Sbjct: 33  SNPGRDKVVAPVVRYKNVNEVSKPSAVLVSLDEFLELIGR 72


>ref|XP_003553007.1| PREDICTED: nicastrin-like [Glycine max]
          Length = 619

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = +2

Query: 227 SNPGHGKVAAPVVKFKNVNELAEPSAVLVSMDEFQSLSSR 346
           SNPG  KV AP+V+F+NV+ +AEPSAVLVS+DEF +L +R
Sbjct: 10  SNPGRDKVVAPIVRFENVDRIAEPSAVLVSLDEFPTLFTR 49


>ref|XP_003538387.1| PREDICTED: nicastrin-like [Glycine max]
          Length = 642

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/40 (60%), Positives = 35/40 (87%)
 Frame = +2

Query: 227 SNPGHGKVAAPVVKFKNVNELAEPSAVLVSMDEFQSLSSR 346
           SNPG  KV AP+++F+NV+++AEPSA+LVS+DEF +L +R
Sbjct: 33  SNPGRDKVVAPILRFENVDKIAEPSAILVSLDEFPTLFTR 72


Top