BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022009
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subc...   102   3e-25
gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-...   102   3e-25
gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-...   102   3e-25
gb|ABF95942.1| retrotransposon protein, putative, unclassified, ...   100   8e-25
gb|AAV32231.1| putative polyprotein [Oryza sativa Japonica Group]     100   1e-24

>gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  102 bits (255), Expect(2) = 3e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = -3

Query: 262  LPVDILKEIFYPAWLSNPVLVKKPDLFWRMCVDYTDLNKTCPKNYHPLTVIDQKVDALTG 83
            L    +KE+ +P WL+NPV+V+K +  WRMCVD+TDLNK CPK++ PL  IDQ VD+  G
Sbjct: 881  LKAGFIKEVLHPEWLANPVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 940

Query: 82   FLILYFINAYKGYHQILTEEENASKT 5
              +L FI+AY GYHQI   +E+  KT
Sbjct: 941  CELLSFIDAYSGYHQISMAKEDEEKT 966



 Score = 37.4 bits (85), Expect(2) = 3e-25
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -1

Query: 402 PQDMTAISKKITTHKLNINMGIKPVIQR*RTFALECNFIINGEIDSLFQ 256
           P DM+ + ++I  HKL +    KPV QR R FA +    I  E+D L +
Sbjct: 834 PSDMSGVPREIIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLK 882


>gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1403

 Score =  102 bits (255), Expect(2) = 3e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = -3

Query: 262  LPVDILKEIFYPAWLSNPVLVKKPDLFWRMCVDYTDLNKTCPKNYHPLTVIDQKVDALTG 83
            L    +KE+ +P WL+NPV+V+K +  WRMCVD+TDLNK CPK++ PL  IDQ VD+  G
Sbjct: 871  LKAGFIKEVLHPEWLANPVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 930

Query: 82   FLILYFINAYKGYHQILTEEENASKT 5
              +L FI+AY GYHQI   +E+  KT
Sbjct: 931  CELLSFIDAYSGYHQISMAKEDEEKT 956



 Score = 37.4 bits (85), Expect(2) = 3e-25
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -1

Query: 402 PQDMTAISKKITTHKLNINMGIKPVIQR*RTFALECNFIINGEIDSLFQ 256
           P DM+ + ++I  HKL +    KPV QR R FA +    I  E+D L +
Sbjct: 824 PSDMSGVPREIIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLK 872


>gb|AAO66548.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1380

 Score =  102 bits (255), Expect(2) = 3e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = -3

Query: 262  LPVDILKEIFYPAWLSNPVLVKKPDLFWRMCVDYTDLNKTCPKNYHPLTVIDQKVDALTG 83
            L    +KE+ +P WL+NPV+V+K +  WRMCVD+TDLNK CPK++ PL  IDQ VD+  G
Sbjct: 848  LKAGFIKEVLHPEWLANPVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 907

Query: 82   FLILYFINAYKGYHQILTEEENASKT 5
              +L FI+AY GYHQI   +E+  KT
Sbjct: 908  CELLSFIDAYSGYHQISMAKEDEEKT 933



 Score = 37.4 bits (85), Expect(2) = 3e-25
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -1

Query: 402 PQDMTAISKKITTHKLNINMGIKPVIQR*RTFALECNFIINGEIDSLFQ 256
           P DM+ + ++I  HKL +    KPV QR R FA +    I  E+D L +
Sbjct: 801 PSDMSGVPREIIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLK 849


>gb|ABF95942.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 793

 Score =  100 bits (250), Expect(2) = 8e-25
 Identities = 44/86 (51%), Positives = 61/86 (70%)
 Frame = -3

Query: 262 LPVDILKEIFYPAWLSNPVLVKKPDLFWRMCVDYTDLNKTCPKNYHPLTVIDQKVDALTG 83
           L V  ++E+ +P WL+NPV+V+  +  WRMCVD+TDLNK CPK++ PL  IDQ VD+  G
Sbjct: 91  LKVGFIREVLHPEWLANPVMVRNANEKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 150

Query: 82  FLILYFINAYKGYHQILTEEENASKT 5
             +L F++AY GYHQI   +E+  KT
Sbjct: 151 CELLSFLDAYSGYHQISMAKEDEEKT 176



 Score = 37.7 bits (86), Expect(2) = 8e-25
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -1

Query: 402 PQDMTAISKKITTHKLNINMGIKPVIQR*RTFALECNFIINGEIDSLFQ 256
           P DM  + +++  HKL +    KPV Q+ R FAL+    I  E+D L +
Sbjct: 44  PSDMPGVPREVIEHKLMVRPDAKPVKQKLRRFALDRKQAIREELDKLLK 92


>gb|AAV32231.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 3092

 Score =  100 bits (250), Expect(2) = 1e-24
 Identities = 44/86 (51%), Positives = 61/86 (70%)
 Frame = -3

Query: 262  LPVDILKEIFYPAWLSNPVLVKKPDLFWRMCVDYTDLNKTCPKNYHPLTVIDQKVDALTG 83
            L    ++E+ +P WL+NPV+V+K +  WRMCVD+TDLNK CPK++ PL  IDQ VD+  G
Sbjct: 2265 LKAGFIREVLHPEWLANPVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAG 2324

Query: 82   FLILYFINAYKGYHQILTEEENASKT 5
              +L F++AY GYHQI   +E+  KT
Sbjct: 2325 CELLSFLDAYSGYHQISMAKEDEEKT 2350



 Score = 37.4 bits (85), Expect(2) = 1e-24
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -1

Query: 405  TPQDMTAISKKITTHKLNINMGIKPVIQR*RTFALECNFIINGEIDSLFQ 256
            TP DM  + +++  HKL +    KPV QR R FA +    I  E+D L +
Sbjct: 2217 TPSDMPGVPREVIEHKLMMRPDAKPVKQRLRRFAPDRKQAIREELDKLLK 2266



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/73 (41%), Positives = 39/73 (53%)
 Frame = -3

Query: 223 WLSNPVLVKKPDLFWRMCVDYTDLNKTCPKNYHPLTVIDQKVDALTGFLILYFINAYKGY 44
           W +  + V+K D   RMCVDY  LN    KN +PL  ID   D L G  +   I+   GY
Sbjct: 679 WGAPVIFVEKKDHTQRMCVDYCALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGY 738

Query: 43  HQILTEEENASKT 5
           HQ+  +EE+  KT
Sbjct: 739 HQLRIKEEDIPKT 751