BLASTX nr result

ID: Cephaelis21_contig00022007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022007
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    97   2e-18
ref|XP_002325779.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat...    96   4e-18
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]     96   4e-18

>ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|222853579|gb|EEE91126.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/97 (47%), Positives = 62/97 (63%)
 Frame = +2

Query: 206 NLDDALGFYDQMVRTRPLPTVWDFNRLLGRVVKMKNYSHAISLYTSMCFKGIPVDECTLN 385
           NLDDAL  +++M+   P P + +FNRLL  VV+MK Y   +SL+  M F+GI  + CTL+
Sbjct: 20  NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79

Query: 386 TIINCYCLEGRVDLGFSLLGAFFKRGLAPTVITFGTL 496
            +INC+C    VD GFS+ G   KRG  P V+ F TL
Sbjct: 80  ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTL 116


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/98 (46%), Positives = 61/98 (62%)
 Frame = +2

Query: 203 SNLDDALGFYDQMVRTRPLPTVWDFNRLLGRVVKMKNYSHAISLYTSMCFKGIPVDECTL 382
           SN DDAL +++QMV   P P +  FN+LL  +V+MK+Y   +S+Y  M F G+     TL
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 383 NTIINCYCLEGRVDLGFSLLGAFFKRGLAPTVITFGTL 496
             +INC C    V LGFS+LG  FK G  P++ITF TL
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTL 180


>ref|XP_002325779.1| predicted protein [Populus trichocarpa] gi|222862654|gb|EEF00161.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = +2

Query: 206 NLDDALGFYDQMVRTRPLPTVWDFNRLLGRVVKMKNYSHA-ISLYTSMCFKGIPVDECTL 382
           N+DDAL  ++ M+  +PLP +  FN+LL  +V+M+ Y  A ISL   M   G+  + CTL
Sbjct: 70  NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129

Query: 383 NTIINCYCLEGRVDLGFSLLGAFFKRGLAPTVITFGTL 496
           N +INC+CL   VDLGFS+L    K GL PT+ITF TL
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167


>ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/101 (50%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +2

Query: 197 KLSNLDDALGFYDQMVRTRPLPTVWDFNRLLGRVVKMKNYSHAISLYTSMCFK-GIPVDE 373
           KL N+D+AL  +  M R +PLP+V DF  LLG +V++K+Y+ AISL   M    GI  D 
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 374 CTLNTIINCYCLEGRVDLGFSLLGAFFKRGLAPTVITFGTL 496
            TLN +INC C    V  GFS+LG  FK GL PTV+T  TL
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTL 153


>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/107 (44%), Positives = 69/107 (64%)
 Frame = +2

Query: 176 GLTNEIRKLSNLDDALGFYDQMVRTRPLPTVWDFNRLLGRVVKMKNYSHAISLYTSMCFK 355
           G++NE + +  LDDA   + QMVRT+PLP+V  F++LL  +V MK+YS  +SL+  +   
Sbjct: 42  GVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKL 101

Query: 356 GIPVDECTLNTIINCYCLEGRVDLGFSLLGAFFKRGLAPTVITFGTL 496
            IPV E  L+ ++N  CL  R DLGFS+L   FK+G+    +TF TL
Sbjct: 102 RIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTL 148


Top