BLASTX nr result

ID: Cephaelis21_contig00021959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021959
         (2092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   534   e-149
ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2...   519   e-144
ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|2...   503   e-140
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3...   496   e-137
ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis tha...   496   e-137

>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
            protein product [Vitis vinifera]
          Length = 421

 Score =  534 bits (1375), Expect = e-149
 Identities = 282/382 (73%), Positives = 311/382 (81%), Gaps = 2/382 (0%)
 Frame = -1

Query: 1696 VQSFRNDLSGASTQLCYFSSRARRXXXXXXXXXXXENLSKKDLALNQALEQIKSAFGPGT 1517
            V+ FR  + G S+Q C FSS+ RR           ENLSKK+LAL QAL+QI ++FG G+
Sbjct: 18   VEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKELALRQALDQITTSFGKGS 77

Query: 1516 IMWLGRSAPVHRVPVVSTGSFALDIALGVGGLPKGRVVEIYGPEASGKTTLGLHVIAEAQ 1337
            IMWLGRS     VPVVSTGSFALDI LG+GGLPKGRVVEIYGPEASGKTTL LHVIAEAQ
Sbjct: 78   IMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQ 137

Query: 1336 KQGGYCVFVDAEHALDPSLARAIGVNTDNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXX 1157
            KQGGYCVFVDAEHALDP+LA AIGVNT NLLLSQPDCGEQALSLVDTLIRSG        
Sbjct: 138  KQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVD 197

Query: 1156 XXXALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSLV-G 980
               ALVPK ELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLS   G
Sbjct: 198  SVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFGG 257

Query: 979  FGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGDETIGSQVQVKIVKNKHAPPFRQAEFE 800
            FGGPTEVTCGGNALKFYASVRLNIKRIGLVKKG+ETIGSQV VK+VKNKHAPPF+ A+FE
Sbjct: 258  FGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQVLVKVVKNKHAPPFKTAQFE 317

Query: 799  LEFGKGISRESEIIELGVKHKLIKKNGGYFFLNDGITIHGKEALKQHLAANQSMREELMA 620
            LEFGKGI RESEI+ELG KHK I K GG  +  +G +  GK+A+KQ L+ N+S REELM 
Sbjct: 318  LEFGKGICRESEIVELGCKHKFIIKGGGAMYSYNGQSFRGKDAIKQFLSQNESEREELMR 377

Query: 619  KLREKLT-DSGATEETDAEVIE 557
            KLREKL  ++   +E +AE ++
Sbjct: 378  KLREKLVGETNKEKELEAEAVD 399


>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  519 bits (1336), Expect = e-144
 Identities = 272/380 (71%), Positives = 303/380 (79%)
 Frame = -1

Query: 1693 QSFRNDLSGASTQLCYFSSRARRXXXXXXXXXXXENLSKKDLALNQALEQIKSAFGPGTI 1514
            +  R  + G STQ+C F+++ +R           EN+SKK+LAL QAL+QI S FG G I
Sbjct: 19   EGIRRGVLGTSTQICNFATKGKRKSKSDGSESGEENMSKKELALQQALDQITSQFGKGAI 78

Query: 1513 MWLGRSAPVHRVPVVSTGSFALDIALGVGGLPKGRVVEIYGPEASGKTTLGLHVIAEAQK 1334
            MW GRS     VPVVSTGSFALDIALG GG PKGRVVEI+GPEASGKTTL LHVIAEAQK
Sbjct: 79   MWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVVEIFGPEASGKTTLALHVIAEAQK 138

Query: 1333 QGGYCVFVDAEHALDPSLARAIGVNTDNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXX 1154
            QGGYCVFVDAEHALD SLA+AIGVNT+NLLLSQPDCGEQALSLVDTLIRSG         
Sbjct: 139  QGGYCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 198

Query: 1153 XXALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSLVGFG 974
              ALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLS SQTIL+FINQVRAKLS  GFG
Sbjct: 199  VAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSQSQTILVFINQVRAKLSTFGFG 258

Query: 973  GPTEVTCGGNALKFYASVRLNIKRIGLVKKGDETIGSQVQVKIVKNKHAPPFRQAEFELE 794
            GPTEVTCGGNALKFYASVRLNI+R+G +KKG+ET G+QVQVKIVKNK APPF+  +FELE
Sbjct: 259  GPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGTQVQVKIVKNKLAPPFKTVQFELE 318

Query: 793  FGKGISRESEIIELGVKHKLIKKNGGYFFLNDGITIHGKEALKQHLAANQSMREELMAKL 614
            FGKGISRESEIIEL +KHKLIKK+G ++  N G   HGKEA K+ LA N  ++EELM KL
Sbjct: 319  FGKGISRESEIIELALKHKLIKKSGSFYDCN-GKKYHGKEAFKEFLAHNDDVQEELMMKL 377

Query: 613  REKLTDSGATEETDAEVIEG 554
            REKL +    +E   E  +G
Sbjct: 378  REKLLEGETGQELGDESTDG 397


>ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|222872426|gb|EEF09557.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  503 bits (1296), Expect = e-140
 Identities = 262/343 (76%), Positives = 286/343 (83%)
 Frame = -1

Query: 1582 SKKDLALNQALEQIKSAFGPGTIMWLGRSAPVHRVPVVSTGSFALDIALGVGGLPKGRVV 1403
            SKKDLAL QAL+QI S FG G+IMW GRS     VPVVSTGSFALDIALG GG PKGRVV
Sbjct: 1    SKKDLALQQALDQITSQFGKGSIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVV 60

Query: 1402 EIYGPEASGKTTLGLHVIAEAQKQGGYCVFVDAEHALDPSLARAIGVNTDNLLLSQPDCG 1223
            EI+GPEASGKTTL LHVIAEAQKQGGYCVF+DAEHALD SLA+AIGVNT+NLLLSQPDCG
Sbjct: 61   EIFGPEASGKTTLALHVIAEAQKQGGYCVFMDAEHALDSSLAKAIGVNTENLLLSQPDCG 120

Query: 1222 EQALSLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSL 1043
            EQALSLVDTLIRSG           ALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSL
Sbjct: 121  EQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSL 180

Query: 1042 SLSQTILIFINQVRAKLSLVGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGDETIGS 863
            S SQT+LIFINQVRAKLS  GFGGPTEVTCGGNALKFYASVRLNI+R+G +KKG+ET G+
Sbjct: 181  SQSQTVLIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGT 240

Query: 862  QVQVKIVKNKHAPPFRQAEFELEFGKGISRESEIIELGVKHKLIKKNGGYFFLNDGITIH 683
            QVQVKI KNK APPF+  +FELEFGKGISRESEIIEL VKHK IKKNG ++  N G   H
Sbjct: 241  QVQVKIAKNKLAPPFKTVQFELEFGKGISRESEIIELAVKHKFIKKNGAFYDCN-GRKYH 299

Query: 682  GKEALKQHLAANQSMREELMAKLREKLTDSGATEETDAEVIEG 554
            GKEAL++ LA N  ++EELM KLREKL ++   +E   E  +G
Sbjct: 300  GKEALREFLAHNDDVQEELMMKLREKLLEAETDQELKDETTDG 342


>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Glycine max]
          Length = 459

 Score =  496 bits (1277), Expect = e-137
 Identities = 264/371 (71%), Positives = 298/371 (80%), Gaps = 1/371 (0%)
 Frame = -1

Query: 1663 STQLCYFSSRARRXXXXXXXXXXXENLSKKDLALNQALEQIKSAFGPGTIMWLGRSAPVH 1484
            ++Q+  FSS+ RR           EN+SKK+LAL QAL+QI SAFG G+IMWLGRS    
Sbjct: 54   TSQILSFSSKGRRRSKSDGSDSGEENMSKKELALQQALDQITSAFGKGSIMWLGRSVSPK 113

Query: 1483 RVPVVSTGSFALDIALGVGGLPKGRVVEIYGPEASGKTTLGLHVIAEAQKQGGYCVFVDA 1304
             VPVVSTGSFALD+ALG+GGLPKGRVVEIYGPEASGKTTL LHVIAEAQKQGGYCVFVDA
Sbjct: 114  NVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDA 173

Query: 1303 EHALDPSLARAIGVNTDNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXXALVPKSEL 1124
            EHALD +LA +IGVNT NLLLSQPDCGEQALSLVDTLIRSG           ALVPK EL
Sbjct: 174  EHALDKTLAESIGVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGEL 233

Query: 1123 DGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSLV-GFGGPTEVTCGG 947
            DGEMGDAHMAMQARLMSQALRKLSH+LSLSQTILIFINQVR+K+S   GF GPTEVTCGG
Sbjct: 234  DGEMGDAHMAMQARLMSQALRKLSHALSLSQTILIFINQVRSKISTFGGFSGPTEVTCGG 293

Query: 946  NALKFYASVRLNIKRIGLVKKGDETIGSQVQVKIVKNKHAPPFRQAEFELEFGKGISRES 767
            NALKFYASVRLNIKRIG VKKG+E +GSQV VK+VKNK APPF+ AEFEL+FGKGI +E+
Sbjct: 294  NALKFYASVRLNIKRIGFVKKGEEILGSQVLVKVVKNKLAPPFKTAEFELQFGKGICKET 353

Query: 766  EIIELGVKHKLIKKNGGYFFLNDGITIHGKEALKQHLAANQSMREELMAKLREKLTDSGA 587
            EII+L V HKLI K G  F+ N+  +  GK+ALK  LA N+S  EEL  KLREKL ++  
Sbjct: 354  EIIDLSVNHKLISKAGAMFYYNEH-SFRGKDALKNFLAENRSALEELEMKLREKLLNAET 412

Query: 586  TEETDAEVIEG 554
             +  +++VI G
Sbjct: 413  EKMQESDVING 423


>ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
            gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
            repair protein recA homolog 3, mitochondrial; AltName:
            Full=Recombinase A homolog 3; Flags: Precursor
            gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
            thaliana] gi|330251794|gb|AEC06888.1| DNA repair protein
            recA-like 3 [Arabidopsis thaliana]
          Length = 430

 Score =  496 bits (1276), Expect = e-137
 Identities = 266/375 (70%), Positives = 304/375 (81%), Gaps = 2/375 (0%)
 Frame = -1

Query: 1684 RNDLSGASTQLCYFSSRARRXXXXXXXXXXXENLSKKDLALNQALEQIKSAFGPGTIMWL 1505
            R  + G S QL  F+++A++           E +SKK++AL QAL+QI S+FG G+IM+L
Sbjct: 22   RRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYL 81

Query: 1504 GRSAPVHRVPVVSTGSFALDIALGVGGLPKGRVVEIYGPEASGKTTLGLHVIAEAQKQGG 1325
            GR+     VPV STGSFALD+ALGVGGLPKGRVVEIYGPEASGKTTL LHVIAEAQKQGG
Sbjct: 82   GRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGG 141

Query: 1324 YCVFVDAEHALDPSLARAIGVNTDNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXXA 1145
             CVFVDAEHALD SLA+AIGVNT+NLLLSQPDCGEQALSLVDTLIRSG           A
Sbjct: 142  TCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAA 201

Query: 1144 LVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSLV-GFGGP 968
            LVPK EL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQVR+KLS   GFGGP
Sbjct: 202  LVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGP 261

Query: 967  TEVTCGGNALKFYASVRLNIKRIGLVKKGDETIGSQVQVKIVKNKHAPPFRQAEFELEFG 788
            TEVTCGGNALKFYAS+RLNIKRIGL+KKG+ET GSQV VKIVKNK APPFR A+FELEFG
Sbjct: 262  TEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVSVKIVKNKLAPPFRTAQFELEFG 321

Query: 787  KGISRESEIIELGVKHKLIKKNGGYFFLNDGITIHGKEALKQHLAANQSMREELMAKLRE 608
            KGI + +EII+L +KHK I KNG ++ LN G   HGKEALK+ L  N+S +EELM KL++
Sbjct: 322  KGICKITEIIDLSIKHKFIAKNGTFYNLN-GKNYHGKEALKRFLKQNESDQEELMKKLQD 380

Query: 607  KL-TDSGATEETDAE 566
            KL  D  A +ET++E
Sbjct: 381  KLIADEAADKETESE 395


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