BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021886
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               85   2e-14
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    82   3e-13
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    82   3e-13
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    80   6e-13
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   6e-12

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 77/326 (23%), Positives = 140/326 (42%), Gaps = 7/326 (2%)
 Frame = -1

Query: 965  FSLSSAYLLLRQHGQIMPDITPFWDTRIPRKISIFGWKLFNGFLPFPEVLMSFGFHLPSK 786
            F+  SAY+      +        W  + P K+S   W+L    LPF + +  F  ++ S 
Sbjct: 548  FTTKSAYVDCSNTREKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSN 607

Query: 785  CPCCPAL--DSLDHSLLQCPTAQYLWKYFSDMFELQFDSSAGIFELLHS--NLSMHNSTP 618
            C CC  +  ++++H  L    A YLWK F     +   +S+ I  LL +  N+  HNS  
Sbjct: 608  CVCCKNMKTETINHVFLNSDVASYLWKKFGGTLGIDTRASSTI-NLLKTWWNVQTHNSI- 665

Query: 617  EYSYLHQIIPLLITWTLWRLRNSILFNGAKAVHSQLIGHVIFLLHSIFVKQPLP---ISQ 447
             ++ +   +P+LI W +W+ R +  +   K +  + + + ++    + ++   P   I  
Sbjct: 666  -HNVIIHTLPILIFWEIWKRRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEIGN 724

Query: 446  KTTTLHNCPILPTVIRKRKILRVSWLLPPFSKLAINVDXXXXXXXXXXXXGFILRDWRGQ 267
                L N         K KI  V W  P  + + IN D            G+I+RD   +
Sbjct: 725  SWRDLLNKVESLRPYPKWKI--VHWNTPNINCVKINTD--GSFSSGNAGLGWIVRDHTRR 780

Query: 266  ILYARSEYFGSGTSFQAEVQCLLRGLQYCTEMNLTSVRIESDSKTLVDMVNSRASWPWRQ 87
            ++ A S      ++  AE      G+ +C +    +  +E DSK +VDMV +  +   + 
Sbjct: 781  MIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKI 840

Query: 86   *HQITQICNLLQSSSSALSHIFRETN 9
               +  I  ++   +  ++H +RE N
Sbjct: 841  KGVVEDIIQVVAKMNCEVNHCYREAN 866


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 3/275 (1%)
 Frame = -1

Query: 929 HGQIMPDI-TPFWDTRIPRKISIFGWKLFNGFLPFPEVLMSFGFHLPSKCPCCPAL-DSL 756
           HG I  D+ T  W+  I  K+  F W+  +  L   E L + G  +   CP C    +S+
Sbjct: 153 HGSI--DLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESI 210

Query: 755 DHSLLQCPTAQYLWKYFSDMFELQFDSSAGIFELLHSNLSMHNSTPEYSYLHQIIPLLIT 576
           +H+L  CP A   W+  SD   ++    +  FE   SN+         S  H+++P+ + 
Sbjct: 211 NHALFTCPFATMAWR-LSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLI 269

Query: 575 WTLWRLRNSILFNGAKAVHSQLIGHVIFLLHSIFVKQPLPISQKTTTLHNCPILPTVIRK 396
           W +W+ RN+++FN  +   S+ +         +  K         T  H     PT  R+
Sbjct: 270 WRIWKARNNVVFNKFRESPSKTV---------LSAKAETHDWLNATQSHKKTPSPT--RQ 318

Query: 395 RKILRVSWLLPPFSKLAINVDXXXXXXXXXXXXGFILRDWRG-QILYARSEYFGSGTSFQ 219
               ++ W  PP + +  N D            G+I+R+  G  I +   +   +    +
Sbjct: 319 IAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLE 378

Query: 218 AEVQCLLRGLQYCTEMNLTSVRIESDSKTLVDMVN 114
           AE + LL  LQ       T V +E D +TL++++N
Sbjct: 379 AETKALLAALQQTWIRGYTQVFMEGDCQTLINLIN 413


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 3/275 (1%)
 Frame = -1

Query: 929  HGQIMPDI-TPFWDTRIPRKISIFGWKLFNGFLPFPEVLMSFGFHLPSKCPCCPAL-DSL 756
            HG I  D+ T  W+  I  K+  F W+  +  L   E L + G  +   CP C    +S+
Sbjct: 1419 HGSI--DLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESI 1476

Query: 755  DHSLLQCPTAQYLWKYFSDMFELQFDSSAGIFELLHSNLSMHNSTPEYSYLHQIIPLLIT 576
            +H+L  CP A   W+  SD   ++    +  FE   SN+         S  H+++P+ + 
Sbjct: 1477 NHALFTCPFATMAWR-LSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLI 1535

Query: 575  WTLWRLRNSILFNGAKAVHSQLIGHVIFLLHSIFVKQPLPISQKTTTLHNCPILPTVIRK 396
            W +W+ RN+++FN  +   S+ +         +  K         T  H     PT  R+
Sbjct: 1536 WRIWKARNNVVFNKFRESPSKTV---------LSAKAETHDWLNATQSHKKTPSPT--RQ 1584

Query: 395  RKILRVSWLLPPFSKLAINVDXXXXXXXXXXXXGFILRDWRG-QILYARSEYFGSGTSFQ 219
                ++ W  PP + +  N D            G+I+R+  G  I +   +   +    +
Sbjct: 1585 IAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLE 1644

Query: 218  AEVQCLLRGLQYCTEMNLTSVRIESDSKTLVDMVN 114
            AE + LL  LQ       T V +E D +TL++++N
Sbjct: 1645 AETKALLAALQQTWIRGYTQVFMEGDCQTLINLIN 1679


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 3/275 (1%)
 Frame = -1

Query: 929  HGQIMPDI-TPFWDTRIPRKISIFGWKLFNGFLPFPEVLMSFGFHLPSKCPCCPAL-DSL 756
            HG I  D+ T  W+  I  K+  F W+  +  L   E L + G  +   CP C    +S+
Sbjct: 1193 HGSI--DLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESI 1250

Query: 755  DHSLLQCPTAQYLWKYFSDMFELQFDSSAGIFELLHSNLSMHNSTPEYSYLHQIIPLLIT 576
            +H+L  CP A   W + SD   ++    +  FE   SN+         S  H+++P+ + 
Sbjct: 1251 NHALFTCPFATMAW-WLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLI 1309

Query: 575  WTLWRLRNSILFNGAKAVHSQLIGHVIFLLHSIFVKQPLPISQKTTTLHNCPILPTVIRK 396
            W +W+ RN+++FN  +   S+ +         +  K         T  H     PT  R+
Sbjct: 1310 WRIWKARNNVVFNKFRESPSKTV---------LSAKAETHDWLNATQSHKKTPSPT--RQ 1358

Query: 395  RKILRVSWLLPPFSKLAINVDXXXXXXXXXXXXGFILRDWRG-QILYARSEYFGSGTSFQ 219
                ++ W  PP + +  N D            G+I+R+  G  I +   +   +    +
Sbjct: 1359 IAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLE 1418

Query: 218  AEVQCLLRGLQYCTEMNLTSVRIESDSKTLVDMVN 114
            AE + LL  LQ       T V +E D +TL++++N
Sbjct: 1419 AETKALLAALQQTWIRGYTQVFMEGDCQTLINLIN 1453


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 17/307 (5%)
 Frame = -1

Query: 896  WDTRIPRKISIFGWKLFNGFLPFPEVLMSFGFHLPSKCPCCPA-LDSLDHSLLQCPTAQY 720
            W    P KI  F WK  N  L     L      +P  C  C    +++ H   QCP    
Sbjct: 1053 WGIHAPPKIKNFLWKACNDGLATTSRLERSHIFVPQNCCFCDCPSETICHLCFQCPFTLD 1112

Query: 719  LWKYFSDMFE----------LQFDSSAGIFELLHSNLSMHNSTPEYSYLHQIIPLLITWT 570
            ++ +  D F+          LQ  S   + E  H NL++        YL ++   ++ W 
Sbjct: 1113 IYSHLEDKFQWPAYPSWFSTLQLSSFRSVLEACHINLTLE-------YLTKLS--IVWWH 1163

Query: 569  LWRLRNSILFNGAKAVHSQLIGHVIFLLHSI---FVKQPLPISQKTTTLHNCPILPTVIR 399
            +W  RN ++FN      SQ      F++HS    + K  L I    T L     LP    
Sbjct: 1164 VWYFRNKLIFNNESTSFSQ----ASFIIHSFMGKWEKANLEIPSFNTPLPKDCKLPVRSG 1219

Query: 398  KRKILRVSWLLPPFSKLAINVDXXXXXXXXXXXXGFILRDWRGQILYARSEYFGSGTS-F 222
            K  I    W  P    L +N D            GF++R+  G++L AR++  G   S  
Sbjct: 1220 KNLI----WSPPNEDVLKVNFD-GSKLDNGQAAYGFVIRNSNGEVLMARAKALGVYPSIL 1274

Query: 221  QAEVQCLLRGLQYCTEMNLTSVRI--ESDSKTLVDMVNSRASWPWRQ*HQITQICNLLQS 48
             AE   LL G++    +   S +I  E D+  +++ ++  A+ PW        I N++  
Sbjct: 1275 MAEAMGLLEGIKGAISLQNWSRKIIFEGDNIAVINAMSPSATGPW-------TIANIILD 1327

Query: 47   SSSALSH 27
            + + L H
Sbjct: 1328 AGALLGH 1334