BLASTX nr result

ID: Cephaelis21_contig00021305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021305
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro...    75   7e-12
ref|XP_002870097.1| ribosomal protein L19 family protein [Arabid...    70   2e-10
ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...    69   3e-10
gb|ACF23041.1| ST10 [Eutrema halophilum]                               69   3e-10
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]    69   3e-10

>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
           ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 221

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 54/150 (36%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
 Frame = +3

Query: 18  MASIVLPQALCTILRNSGQSQTASQKLGAFSAAVSQKTXXXXXXXXXXXXXXXXFGKVNS 197
           MAS +LPQA+ +I RN   +Q A ++LG  SA    +                       
Sbjct: 1   MASKILPQAVISIPRNP--NQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPL 58

Query: 198 HRSFVLRXXXXXXXXXXXXX-------------------KPRGMPRIKFGDVMGILNKRA 320
            R+FV+R                                KP   PR+K GDVMGILNKRA
Sbjct: 59  RRAFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRA 118

Query: 321 IEESEELRPRPDIRTGDVVEFKMEFSDKWR 410
           IE SE+ RP PDIRTGD+VE K+E  +  R
Sbjct: 119 IEASEKERPIPDIRTGDIVELKLEVQENRR 148


>ref|XP_002870097.1| ribosomal protein L19 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297315933|gb|EFH46356.1| ribosomal protein
           L19 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/51 (64%), Positives = 41/51 (80%)
 Frame = +3

Query: 258 KPRGMPRIKFGDVMGILNKRAIEESEELRPRPDIRTGDVVEFKMEFSDKWR 410
           KP+  PRIK GDVMGILN+RAIE SE++RP P+IRTGD+VE K+E  +  R
Sbjct: 102 KPQRKPRIKLGDVMGILNQRAIEVSEKVRPVPEIRTGDIVEIKLEVPENKR 152


>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
           vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
           product [Vitis vinifera]
          Length = 231

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +3

Query: 258 KPRGMPRIKFGDVMGILNKRAIEESEELRPRPDIRTGDVVEFKMEFSDKWR 410
           KP   PR+K GD+MGILNKRAIE SE+ RP PD+RTGD+VE K+E  +  R
Sbjct: 108 KPPRKPRVKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRR 158


>gb|ACF23041.1| ST10 [Eutrema halophilum]
          Length = 136

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +3

Query: 258 KPRGMPRIKFGDVMGILNKRAIEESEELRPRPDIRTGDVVEFKMEFSDKWR 410
           KP   PRIK GDVMGILN+RAIE SE++RP P+IRTGD+VE K+E  +  R
Sbjct: 13  KPARKPRIKLGDVMGILNQRAIEVSEKVRPVPEIRTGDIVEIKLEVPENRR 63


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +3

Query: 258 KPRGMPRIKFGDVMGILNKRAIEESEELRPRPDIRTGDVVEFKMEFSDKWR 410
           KP   PR+K GD+MGILNKRAIE SE+ RP PD+RTGD+VE K+E  +  R
Sbjct: 108 KPPRKPRVKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRR 158


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