BLASTX nr result

ID: Cephaelis21_contig00021098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021098
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025...    65   2e-08
emb|CBI26176.3| unnamed protein product [Vitis vinifera]               65   2e-08
ref|XP_002516787.1| 60S ribosomal protein L34, putative [Ricinus...    65   3e-08
ref|NP_187269.1| ribosomal protein L34e-like protein [Arabidopsi...    62   2e-07
ref|NP_001190335.1| ribosomal protein L34e family protein [Arabi...    62   2e-07

>ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025 [Vitis vinifera]
          Length = 216

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = -2

Query: 620 KLQMANG*TEIIFWAQCGCPIAKLEGWGPKRSRRQKK---SLALYGAGDHR 477
           K+   NG   ++F A+CGCPIAKLEGWGPKR RR KK   SLAL G GD+R
Sbjct: 166 KMAPPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKKALASLALNGGGDNR 216


>emb|CBI26176.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = -2

Query: 620 KLQMANG*TEIIFWAQCGCPIAKLEGWGPKRSRRQKK---SLALYGAGDHR 477
           K+   NG   ++F A+CGCPIAKLEGWGPKR RR KK   SLAL G GD+R
Sbjct: 234 KMAPPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKKALASLALNGGGDNR 284


>ref|XP_002516787.1| 60S ribosomal protein L34, putative [Ricinus communis]
           gi|223543875|gb|EEF45401.1| 60S ribosomal protein L34,
           putative [Ricinus communis]
          Length = 238

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = -2

Query: 620 KLQMANG*TEIIFWAQCGCPIAKLEGWGPKRSRRQKKSL---ALYGAGDHR 477
           K+   NG   ++F A+CGCP+AKLEGWGPK+ RR KK+L   A+ G GDHR
Sbjct: 188 KMAPVNGRAVLLFRARCGCPVAKLEGWGPKKGRRHKKALANVAVNGGGDHR 238


>ref|NP_187269.1| ribosomal protein L34e-like protein [Arabidopsis thaliana]
           gi|6862922|gb|AAF30311.1|AC018907_11 unknown protein
           [Arabidopsis thaliana] gi|62867643|gb|AAY17425.1|
           At3g06180 [Arabidopsis thaliana]
           gi|90962960|gb|ABE02404.1| At3g06180 [Arabidopsis
           thaliana] gi|332640836|gb|AEE74357.1| ribosomal protein
           L34e-like protein [Arabidopsis thaliana]
          Length = 241

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
 Frame = -2

Query: 605 NG*TEIIFWAQCGCPIAKLEGWGPKRSRRQKKS---LALYGAGDHR 477
           NG   ++F ++CGCP+AKLEGWGPKR RR KKS   LAL G  DHR
Sbjct: 196 NGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKKSQANLALKGGVDHR 241


>ref|NP_001190335.1| ribosomal protein L34e family protein [Arabidopsis thaliana]
           gi|334302872|sp|P0C8Q9.3|Y5902_ARATH RecName:
           Full=Uncharacterized protein At5g19025
           gi|332005258|gb|AED92641.1| ribosomal protein L34e
           family protein [Arabidopsis thaliana]
          Length = 259

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = -2

Query: 620 KLQMANG*TEIIFWAQCGCPIAKLEGWGPKRSRRQKKS---LALYGAGDHR 477
           K+   NG   +IF ++CGCPIAKLEGWGPKRSRR KKS   LA+ G  D+R
Sbjct: 209 KMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKKSPAKLAVKGCIDNR 259


Top