BLASTX nr result

ID: Cephaelis21_contig00020357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020357
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV52586.1| proteasome subunit beta type-6 precursor [Nicotia...    62   4e-08
ref|XP_002309021.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|ABK92997.1| unknown [Populus trichocarpa]                           60   2e-07
ref|XP_002331409.1| predicted protein [Populus trichocarpa] gi|1...    59   3e-07
ref|NP_001031759.1| proteasome subunit beta type-6 [Arabidopsis ...    58   7e-07

>gb|ACV52586.1| proteasome subunit beta type-6 precursor [Nicotiana benthamiana]
          Length = 175

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -3

Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135
           MIIGGWDKYEGGKIYGVPLGGTLLEQP
Sbjct: 79  MIIGGWDKYEGGKIYGVPLGGTLLEQP 105


>ref|XP_002309021.1| predicted protein [Populus trichocarpa] gi|222854997|gb|EEE92544.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135
           MIIGGWDKYEGGKIYGVPLGGTLLE P
Sbjct: 114 MIIGGWDKYEGGKIYGVPLGGTLLELP 140


>gb|ABK92997.1| unknown [Populus trichocarpa]
          Length = 227

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135
           MIIGGWDKYEGGKIYGVPLGGTLLE P
Sbjct: 114 MIIGGWDKYEGGKIYGVPLGGTLLELP 140


>ref|XP_002331409.1| predicted protein [Populus trichocarpa] gi|118484942|gb|ABK94336.1|
           unknown [Populus trichocarpa]
           gi|222873623|gb|EEF10754.1| predicted protein [Populus
           trichocarpa]
          Length = 237

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135
           MI+GGWDKYEGGKIYGVPLGGTLLE P
Sbjct: 114 MIVGGWDKYEGGKIYGVPLGGTLLELP 140


>ref|NP_001031759.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
           gi|332660488|gb|AEE85888.1| proteasome subunit beta
           type-6 [Arabidopsis thaliana]
          Length = 234

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = -3

Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135
           +I+GGWDKYEGGKIYG+PLGGT++EQP
Sbjct: 111 LIVGGWDKYEGGKIYGIPLGGTVVEQP 137


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