BLASTX nr result
ID: Cephaelis21_contig00020357
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00020357 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACV52586.1| proteasome subunit beta type-6 precursor [Nicotia... 62 4e-08 ref|XP_002309021.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 gb|ABK92997.1| unknown [Populus trichocarpa] 60 2e-07 ref|XP_002331409.1| predicted protein [Populus trichocarpa] gi|1... 59 3e-07 ref|NP_001031759.1| proteasome subunit beta type-6 [Arabidopsis ... 58 7e-07 >gb|ACV52586.1| proteasome subunit beta type-6 precursor [Nicotiana benthamiana] Length = 175 Score = 62.4 bits (150), Expect = 4e-08 Identities = 27/27 (100%), Positives = 27/27 (100%) Frame = -3 Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135 MIIGGWDKYEGGKIYGVPLGGTLLEQP Sbjct: 79 MIIGGWDKYEGGKIYGVPLGGTLLEQP 105 >ref|XP_002309021.1| predicted protein [Populus trichocarpa] gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa] Length = 237 Score = 59.7 bits (143), Expect = 2e-07 Identities = 26/27 (96%), Positives = 26/27 (96%) Frame = -3 Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135 MIIGGWDKYEGGKIYGVPLGGTLLE P Sbjct: 114 MIIGGWDKYEGGKIYGVPLGGTLLELP 140 >gb|ABK92997.1| unknown [Populus trichocarpa] Length = 227 Score = 59.7 bits (143), Expect = 2e-07 Identities = 26/27 (96%), Positives = 26/27 (96%) Frame = -3 Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135 MIIGGWDKYEGGKIYGVPLGGTLLE P Sbjct: 114 MIIGGWDKYEGGKIYGVPLGGTLLELP 140 >ref|XP_002331409.1| predicted protein [Populus trichocarpa] gi|118484942|gb|ABK94336.1| unknown [Populus trichocarpa] gi|222873623|gb|EEF10754.1| predicted protein [Populus trichocarpa] Length = 237 Score = 59.3 bits (142), Expect = 3e-07 Identities = 25/27 (92%), Positives = 26/27 (96%) Frame = -3 Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135 MI+GGWDKYEGGKIYGVPLGGTLLE P Sbjct: 114 MIVGGWDKYEGGKIYGVPLGGTLLELP 140 >ref|NP_001031759.1| proteasome subunit beta type-6 [Arabidopsis thaliana] gi|332660488|gb|AEE85888.1| proteasome subunit beta type-6 [Arabidopsis thaliana] Length = 234 Score = 58.2 bits (139), Expect = 7e-07 Identities = 22/27 (81%), Positives = 27/27 (100%) Frame = -3 Query: 215 MIIGGWDKYEGGKIYGVPLGGTLLEQP 135 +I+GGWDKYEGGKIYG+PLGGT++EQP Sbjct: 111 LIVGGWDKYEGGKIYGIPLGGTVVEQP 137