BLASTX nr result
ID: Cephaelis21_contig00020286
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00020286
(2791 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003552234.1| PREDICTED: probable LRR receptor-like serine... 767 0.0
gb|ACM89591.1| leucine-rich repeat family protein / protein kina... 766 0.0
ref|XP_003545846.1| PREDICTED: probable LRR receptor-like serine... 755 0.0
ref|XP_002318299.1| predicted protein [Populus trichocarpa] gi|2... 755 0.0
ref|XP_003616915.1| DNA-directed RNA polymerase subunit beta [Me... 749 0.0
>ref|XP_003552234.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
At4g08850-like [Glycine max]
Length = 1074
Score = 767 bits (1980), Expect = 0.0
Identities = 437/969 (45%), Positives = 566/969 (58%), Gaps = 52/969 (5%)
Frame = -3
Query: 2753 LLFVCIAILINAPSEMHHASAQTMESPPLAMLETGNEAKALLAWKASLDNDSQWQVLSSW 2574
LL V + + H A S L + +T EA ALL WKASL N SQ +LSSW
Sbjct: 19 LLIVMLFCAFTVATSRH---ATIPSSASLTLQQT--EANALLKWKASLHNQSQ-ALLSSW 72
Query: 2573 RASTNPCRGGRWFGIQCNKAERXXXXXXXXXXIKGTXXXXXXXXXXXXXSIYLPENALYG 2394
+PC W GI C+ + ++GT ++ + N+L G
Sbjct: 73 -GGNSPCN---WLGIACDHTKSVSNINLTRIGLRGTLQTLSFSSLPNILTLDMSNNSLNG 128
Query: 2393 TIPPSIGNLSRLAFLFMPWNHFSGTIPNEIGRLANLRWLNLFNNSFGGSIPQEIGFL--- 2223
+IPP I LS+L L + NH SG IP EI +L +LR L+L +N+F GSIPQEIG L
Sbjct: 129 SIPPQIRMLSKLTHLNLSDNHLSGEIPFEITQLVSLRILDLAHNAFNGSIPQEIGALRNL 188
Query: 2222 ---------------------SSLTRLDLGHNMLTGSIPISIGNLSDLTFFALAQNQLSG 2106
S L+ L L + LTGSIPISIG L++L++ L QN G
Sbjct: 189 RELTIEFVNLTGTIPNSIGNLSFLSHLSLWNCNLTGSIPISIGKLTNLSYLDLDQNNFYG 248
Query: 2105 HIPLSIVNLTKLNTLFGYENELSGPIPKDIGMLTSLVALELSSNHLTNEIPTSIANLVRL 1926
HIP I L+ L L+ EN SG IP++IG L +L+ NHL+ IP I NL L
Sbjct: 249 HIPREIGKLSNLKYLWLAENNFSGSIPQEIGNLRNLIEFSAPRNHLSGSIPREIGNLRNL 308
Query: 1925 NSFD------------------------IFDNSLIGHMPSSIGNLTSLSVLSLDGNNLSG 1818
F + DN+L G +PSSIGNL +L + L GN LSG
Sbjct: 309 IQFSASRNHLSGSIPSEVGKLHSLVTIKLVDNNLSGPIPSSIGNLVNLDTIRLKGNKLSG 368
Query: 1817 VIPSEIGKLKKLVYLSLFSNQLNGVLPADFNNITHLETLQLSFNYLTGNLPQDVCKGGSL 1638
IPS IG L KL L ++SN+ +G LP + N +T+LE LQLS NY TG+LP ++C G L
Sbjct: 369 SIPSTIGNLTKLTTLVIYSNKFSGNLPIEMNKLTNLENLQLSDNYFTGHLPHNICYSGKL 428
Query: 1637 NGFLVGYNNFIGTLPISSRNCSSLQYFSVRRNQLSGNISEDFGVYPHLETMYLMDNKFYG 1458
F+V N F G +P S +NCSSL + +NQL+GNI++DFGVYPHL+ + L +N FYG
Sbjct: 429 TRFVVKINFFTGPVPKSLKNCSSLTRVRLEQNQLTGNITDDFGVYPHLDYIDLSENNFYG 488
Query: 1457 ELSLDWGKYLHLTALDFSNNKISGKIPAAIGEASQLQSLHLSSNFLEGSIPTSXXXXXXX 1278
LS +WGK +LT+L SNN +SG IP + +A++L LHLSSN L G IP
Sbjct: 489 HLSQNWGKCYNLTSLKISNNNLSGSIPPELSQATKLHVLHLSSNHLTGGIPEDFGNLTYL 548
Query: 1277 XXXXXXXXXLSGEIPQEIGQXXXXXXXXXXXXXXXXSIPEEIGHCVQLLDLNLSQNALTG 1098
LSG +P +I IP ++G+ V+LL LNLSQN
Sbjct: 549 FHLSLNNNNLSGNVPIQIASLQDLATLDLGANYFASLIPNQLGNLVKLLHLNLSQNNFRE 608
Query: 1097 SIPYQMGKMASLATLDLSQNMLATKIPPELGELRSIEMMNLSHNRIPGSIPSTFDNCFSL 918
IP + GK+ L +LDL +N L+ IPP LGEL+S+E +NLSHN + G + S+ D SL
Sbjct: 609 GIPSEFGKLKHLQSLDLGRNFLSGTIPPMLGELKSLETLNLSHNNLSGGL-SSLDEMVSL 667
Query: 917 VSIDISYNQLEGPLPNITAFQKAPYDALRNNKDLCGNIAGLKPCTQSMRKKIAQKHXXXX 738
+S+DISYNQLEG LPNI F+ A +ALRNNK LCGN++GL+PC + K K
Sbjct: 668 ISVDISYNQLEGSLPNIQFFKNATIEALRNNKGLCGNVSGLEPCPKLGDKYQNHKTNKVI 727
Query: 737 XXXXXXXXXXXXXXXXXXVCVKPRTRHDERKRRESNE----NVFCIWCFDGKMAYENFID 570
+ + K + E N F +W FDGK+ YEN ++
Sbjct: 728 LVFLPIGLGTLILALFAFGVSYYLCQSSKTKENQDEESPIRNQFAMWSFDGKIVYENIVE 787
Query: 569 ATQNFNPKHCIGVGAFGSVFRAELPNGQLFAVKKIHATDDGALRNPKSFASEIRTLTRIR 390
AT++F+ KH IGVG G+V++A+L GQ+ AVKK+H +G L N K+F SEI+ L IR
Sbjct: 788 ATEDFDNKHLIGVGGQGNVYKAKLHTGQILAVKKLHLVQNGELSNIKAFTSEIQALINIR 847
Query: 389 HRSIVKLYGFCSHVQHTFLVYEFLEGRNLMQVLSNDETTEKFDWIKRENTIKDVSNALSY 210
HR+IVKLYGFCSH Q +FLVYEFLE ++ ++L +DE FDW R N IK V+NALSY
Sbjct: 848 HRNIVKLYGFCSHSQSSFLVYEFLEKGSIDKILKDDEQAIAFDWDPRINAIKGVANALSY 907
Query: 209 MHHGCSPPIVHRDISSKNILFDSEYDAYISDFGAARLLSPDSSNWTSFVGTYGYAAPELA 30
MHH CSPPIVHRDISSKNI+ D EY A++SDFGAARLL+P+S+NWTSFVGT+GYAAPELA
Sbjct: 908 MHHDCSPPIVHRDISSKNIVLDLEYVAHVSDFGAARLLNPNSTNWTSFVGTFGYAAPELA 967
Query: 29 YTMEVNEKC 3
YTMEVN+KC
Sbjct: 968 YTMEVNQKC 976
>gb|ACM89591.1| leucine-rich repeat family protein / protein kinase family protein
[Glycine max]
Length = 1052
Score = 766 bits (1978), Expect = 0.0
Identities = 429/933 (45%), Positives = 554/933 (59%), Gaps = 52/933 (5%)
Frame = -3
Query: 2645 EAKALLAWKASLDNDSQWQVLSSWRASTNPCRGGRWFGIQCNKAERXXXXXXXXXXIKGT 2466
EA ALL WKASL N SQ +LSSW +PC W GI C+ + ++GT
Sbjct: 28 EANALLKWKASLHNQSQ-ALLSSW-GGNSPCN---WLGIACDHTKSVSNINLTRIGLRGT 82
Query: 2465 XXXXXXXXXXXXXSIYLPENALYGTIPPSIGNLSRLAFLFMPWNHFSGTIPNEIGRLANL 2286
++ + N+L G+IPP I LS+L L + NH SG IP EI +L +L
Sbjct: 83 LQTLSFSSLPNILTLDMSNNSLNGSIPPQIRMLSKLTHLNLSDNHLSGEIPFEITQLVSL 142
Query: 2285 RWLNLFNNSFGGSIPQEIGFL------------------------SSLTRLDLGHNMLTG 2178
R L+L +N+F GSIPQEIG L S L+ L L + LTG
Sbjct: 143 RILDLAHNAFNGSIPQEIGALRNLRELTIEFVNLTGTIPNSIGNLSLLSHLSLWNCNLTG 202
Query: 2177 SIPISIGNLSDLTFFALAQNQLSGHIPLSIVNLTKLNTLFGYENELSGPIPKDIGMLTSL 1998
SIPISIG L++L++ L QN GHIP I L+ L L+ EN SG IP++IG L +L
Sbjct: 203 SIPISIGKLTNLSYLDLDQNNFYGHIPREIGKLSNLKYLWLAENNFSGSIPQEIGNLRNL 262
Query: 1997 VALELSSNHLTNEIPTSIANLVRLNSFD------------------------IFDNSLIG 1890
+ NHL+ IP I NL L F + DN+L G
Sbjct: 263 IEFSAPRNHLSGSIPREIGNLRNLIQFSASRNHLSGSIPSEVGKLHSLVTIKLVDNNLSG 322
Query: 1889 HMPSSIGNLTSLSVLSLDGNNLSGVIPSEIGKLKKLVYLSLFSNQLNGVLPADFNNITHL 1710
+PSSIGNL +L + L GN LSG IPS IG L KL L ++SN+ +G LP + N +T+L
Sbjct: 323 PIPSSIGNLVNLDTIRLKGNKLSGSIPSTIGNLTKLTTLVIYSNKFSGNLPIEMNKLTNL 382
Query: 1709 ETLQLSFNYLTGNLPQDVCKGGSLNGFLVGYNNFIGTLPISSRNCSSLQYFSVRRNQLSG 1530
E LQLS NY TG+LP ++C G L F+V N F G +P S +NCSSL + +NQL+G
Sbjct: 383 ENLQLSDNYFTGHLPHNICYSGKLTRFVVKINFFTGPVPKSLKNCSSLTRVRLEQNQLTG 442
Query: 1529 NISEDFGVYPHLETMYLMDNKFYGELSLDWGKYLHLTALDFSNNKISGKIPAAIGEASQL 1350
NI++DFGVYPHL+ + L +N FYG LS +WGK +LT+L SNN +SG IP + +A++L
Sbjct: 443 NITDDFGVYPHLDYIDLSENNFYGHLSQNWGKCYNLTSLKISNNNLSGSIPPELSQATKL 502
Query: 1349 QSLHLSSNFLEGSIPTSXXXXXXXXXXXXXXXXLSGEIPQEIGQXXXXXXXXXXXXXXXX 1170
LHLSSN L G IP LSG +P +I
Sbjct: 503 HVLHLSSNHLTGGIPEDFGNLTYLFHLSLNNNNLSGNVPIQIASLQDLATLDLGANYFAS 562
Query: 1169 SIPEEIGHCVQLLDLNLSQNALTGSIPYQMGKMASLATLDLSQNMLATKIPPELGELRSI 990
IP ++G+ V+LL LNLSQN IP + GK+ L +LDL +N L+ IPP LGEL+S+
Sbjct: 563 LIPNQLGNLVKLLHLNLSQNNFREGIPSEFGKLKHLQSLDLGRNFLSGTIPPMLGELKSL 622
Query: 989 EMMNLSHNRIPGSIPSTFDNCFSLVSIDISYNQLEGPLPNITAFQKAPYDALRNNKDLCG 810
E +NLSHN + G + S+ D SL+S+DISYNQLEG LPNI F+ A +ALRNNK LCG
Sbjct: 623 ETLNLSHNNLSGGL-SSLDEMVSLISVDISYNQLEGSLPNIQFFKNATIEALRNNKGLCG 681
Query: 809 NIAGLKPCTQSMRKKIAQKHXXXXXXXXXXXXXXXXXXXXXXVCVKPRTRHDERKRRESN 630
N++GL+PC + K K + + K +
Sbjct: 682 NVSGLEPCPKLGDKYQNHKTNKVILVFLPIGLGTLILALFAFGVSYYLCQSSKTKENQDE 741
Query: 629 E----NVFCIWCFDGKMAYENFIDATQNFNPKHCIGVGAFGSVFRAELPNGQLFAVKKIH 462
E N F +W FDGK+ YEN ++AT++F+ KH IGVG G+V++A+L GQ+ AVKK+H
Sbjct: 742 ESPIRNQFAMWSFDGKIVYENIVEATEDFDNKHLIGVGGQGNVYKAKLHTGQILAVKKLH 801
Query: 461 ATDDGALRNPKSFASEIRTLTRIRHRSIVKLYGFCSHVQHTFLVYEFLEGRNLMQVLSND 282
+G L N K+F SEI+ L IRHR+IVKLYGFCSH Q +FLVYEFLE ++ ++L +D
Sbjct: 802 LVQNGELSNIKAFTSEIQALINIRHRNIVKLYGFCSHSQSSFLVYEFLEKGSIDKILKDD 861
Query: 281 ETTEKFDWIKRENTIKDVSNALSYMHHGCSPPIVHRDISSKNILFDSEYDAYISDFGAAR 102
E FDW R N IK V+NALSYMHH CSPPIVHRDISSKNI+ D EY A++SDFGAAR
Sbjct: 862 EQAIAFDWDPRINAIKGVANALSYMHHDCSPPIVHRDISSKNIVLDLEYVAHVSDFGAAR 921
Query: 101 LLSPDSSNWTSFVGTYGYAAPELAYTMEVNEKC 3
LL+P+S+NWTSFVGT+GYAAPELAYTMEVN+KC
Sbjct: 922 LLNPNSTNWTSFVGTFGYAAPELAYTMEVNQKC 954
>ref|XP_003545846.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
At4g08850-like [Glycine max]
Length = 989
Score = 755 bits (1949), Expect = 0.0
Identities = 424/906 (46%), Positives = 546/906 (60%), Gaps = 12/906 (1%)
Frame = -3
Query: 2684 MESPP----LAMLETGNEAKALLAWKASLDNDSQWQVLSSWRASTNPCRGGRWFGIQCNK 2517
M SPP A E EA ALL WKASLDN SQ LSSW + NPC W GI C+
Sbjct: 1 MASPPSYDAFASSEIATEANALLKWKASLDNQSQAS-LSSWTGN-NPCN---WLGISCHD 55
Query: 2516 AERXXXXXXXXXXIKGTXXXXXXXXXXXXXSIYLPENALYGTIPPSIGNLSRLAFLFMPW 2337
+ ++GT + + N L G+IPP I LS L L +
Sbjct: 56 SNSVSNINLTNAGLRGTFQSLNFSLLPNILILNMSHNFLSGSIPPQIDALSNLNTLDLST 115
Query: 2336 NHFSGTIPNEIGRLANLRWLNLFNNSFGGSIPQEIGFLSSLTRLDLGHNMLTGSIPISIG 2157
N SG+IP+ IG L+ L +LNL N G+IP EI L L L LG N+++G +P IG
Sbjct: 116 NKLSGSIPSSIGNLSKLSYLNLRTNDLSGTIPSEITQLIDLHELWLGENIISGPLPQEIG 175
Query: 2156 NLSDLTFFALAQNQLSGHIPLSIVNLTKLNTLFGYENE-LSGPIPKDIGMLTSLVALELS 1980
L +L + L+G IP+SI L L+ L N LSG IP IG L+SL L L
Sbjct: 176 RLRNLRILDTPFSNLTGTIPISIEKLNNLSYLVDLSNNFLSGKIPSTIGNLSSLNYLYLY 235
Query: 1979 SNHLTNEIPTSIANLVRLNSFDIFDNSLIGHMPSSIGNLTSLSVLSLDGNNLSGVIPSEI 1800
N L+ IP + NL L + + DNSL G +P+SIGNL +L+ + L+GN LSG IPS I
Sbjct: 236 RNSLSGSIPDEVGNLHSLFTIQLLDNSLSGPIPASIGNLINLNSIRLNGNKLSGSIPSTI 295
Query: 1799 GKLKKLVYLSLFSNQLNGVLPADFNNITHLETLQLSFNYLTGNLPQDVCKGGSLNGFLVG 1620
G L L LSLF NQL+G +P DFN +T L+ LQL+ N G LP++VC GG L F
Sbjct: 296 GNLTNLEVLSLFDNQLSGKIPTDFNRLTALKNLQLADNNFVGYLPRNVCIGGKLVNFTAS 355
Query: 1619 YNNFIGTLPISSRNCSSLQYFSVRRNQLSGNISEDFGVYPHLETMYLMDNKFYGELSLDW 1440
NNF G +P S +N SSL +++NQL+G+I++ FGV P+L + L DN FYG LS +W
Sbjct: 356 NNNFTGPIPKSLKNFSSLVRVRLQQNQLTGDITDAFGVLPNLYFIELSDNNFYGHLSPNW 415
Query: 1439 GKYLHLTALDFSNNKISGKIPAAIGEASQLQSLHLSSNFLEGSIPTSXXXXXXXXXXXXX 1260
GK+ LT+L SNN +SG IP +G A++L+ LHL SN L G+IP
Sbjct: 416 GKFGSLTSLKISNNNLSGVIPPELGGATKLELLHLFSNHLTGNIP-QDLCNLTLFDLSLN 474
Query: 1259 XXXLSGEIPQEIGQXXXXXXXXXXXXXXXXSIPEEIGHCVQLLDLNLSQNALTGSIPYQM 1080
L+G +P+EI IP+++G+ + LLD++LSQN G+IP ++
Sbjct: 475 NNNLTGNVPKEIASMQKLRTLKLGSNNLSGLIPKQLGNLLYLLDMSLSQNKFQGNIPSEL 534
Query: 1079 GKMASLATLDLSQNMLATKIPPELGELRSIEMMNLSHNRIPGSIPSTFDNCFSLVSIDIS 900
GK+ L +LDLS N L IP GEL+S+E +NLSHN + G + S+FD+ SL SIDIS
Sbjct: 535 GKLKFLTSLDLSGNSLRGTIPSTFGELKSLETLNLSHNNLSGDL-SSFDDMISLTSIDIS 593
Query: 899 YNQLEGPLPNITAFQKAPYDALRNNKDLCGNIAGLKPCTQS-------MRKKIAQKHXXX 741
YNQ EGPLP AF A +ALRNNK LCGN+ GL+ C S MRKK+
Sbjct: 594 YNQFEGPLPKTVAFNNAKIEALRNNKGLCGNVTGLERCPTSSGKSHNHMRKKVI---TVI 650
Query: 740 XXXXXXXXXXXXXXXXXXXVCVKPRTRHDERKRRESNENVFCIWCFDGKMAYENFIDATQ 561
+ T+ +E+ N+F IW FDGKM +EN I+AT+
Sbjct: 651 LPITLGILIMALFVFGVSYYLCQASTKKEEQATNLQTPNIFAIWSFDGKMIFENIIEATE 710
Query: 560 NFNPKHCIGVGAFGSVFRAELPNGQLFAVKKIHATDDGALRNPKSFASEIRTLTRIRHRS 381
NF+ KH IGVG G V++A LP G + AVKK+H+ +G + N K+F SEI+ LT IRHR+
Sbjct: 711 NFDSKHLIGVGGQGCVYKAVLPTGLVVAVKKLHSVPNGEMLNQKAFTSEIQALTEIRHRN 770
Query: 380 IVKLYGFCSHVQHTFLVYEFLEGRNLMQVLSNDETTEKFDWIKRENTIKDVSNALSYMHH 201
IVKLYGFCSH Q +FLV EFLE ++ ++L +D+ FDW KR N +K V+NAL YMHH
Sbjct: 771 IVKLYGFCSHSQFSFLVCEFLEKGSVEKILKDDDQAVAFDWNKRVNVVKCVANALFYMHH 830
Query: 200 GCSPPIVHRDISSKNILFDSEYDAYISDFGAARLLSPDSSNWTSFVGTYGYAAPELAYTM 21
CSPPIVHRDISSKN+L DSEY A++SDFG A+ L+P+SSNWTSFVGT+GYAAPELAYTM
Sbjct: 831 DCSPPIVHRDISSKNVLLDSEYVAHVSDFGTAKFLNPNSSNWTSFVGTFGYAAPELAYTM 890
Query: 20 EVNEKC 3
EVNEKC
Sbjct: 891 EVNEKC 896
>ref|XP_002318299.1| predicted protein [Populus trichocarpa] gi|222858972|gb|EEE96519.1|
predicted protein [Populus trichocarpa]
Length = 993
Score = 755 bits (1949), Expect = 0.0
Identities = 412/881 (46%), Positives = 544/881 (61%)
Frame = -3
Query: 2645 EAKALLAWKASLDNDSQWQVLSSWRASTNPCRGGRWFGIQCNKAERXXXXXXXXXXIKGT 2466
EA+AL WKASLDN+SQ +LSSW T PC+ W G+ C +A ++GT
Sbjct: 45 EAQALQKWKASLDNESQ-SLLSSWNGDT-PCK---WVGVDCYQAGGIANLSLQNAGLRGT 99
Query: 2465 XXXXXXXXXXXXXSIYLPENALYGTIPPSIGNLSRLAFLFMPWNHFSGTIPNEIGRLANL 2286
+ L N+LYGTIP I NLSRL L + +N SG IP+EI L +L
Sbjct: 100 IHSLNFSSFPSLMKLNLSNNSLYGTIPSQISNLSRLTILDLSYNDISGNIPSEISFLKSL 159
Query: 2285 RWLNLFNNSFGGSIPQEIGFLSSLTRLDLGHNMLTGSIPISIGNLSDLTFFALAQNQLSG 2106
R +L NN GS P EIG +SSL+ ++L +N LTG +P SIGN+S L+ F ++ N+L G
Sbjct: 160 RIFSLSNNDMNGSFPPEIGMMSSLSEINLENNHLTGFLPHSIGNMSHLSKFLVSANKLFG 219
Query: 2105 HIPLSIVNLTKLNTLFGYENELSGPIPKDIGMLTSLVALELSSNHLTNEIPTSIANLVRL 1926
IP + +T L L N L+G IP+ IG LT+L+ L L N L+ +P + N+ L
Sbjct: 220 PIPEEVGTMTSLAVLDLNTNSLTGVIPRSIGNLTNLLKLCLYENKLSGSVPEEVGNMRSL 279
Query: 1925 NSFDIFDNSLIGHMPSSIGNLTSLSVLSLDGNNLSGVIPSEIGKLKKLVYLSLFSNQLNG 1746
F + DN+L G +PSSIGNLTSL+VL L NNL+G +P+ +G L+ L +L L N L G
Sbjct: 280 LYFYLCDNNLSGMIPSSIGNLTSLTVLDLGPNNLTGKVPASLGNLRNLSHLYLPYNNLFG 339
Query: 1745 VLPADFNNITHLETLQLSFNYLTGNLPQDVCKGGSLNGFLVGYNNFIGTLPISSRNCSSL 1566
LP + NN+THLE LQ+ N TG+LP+D+C GGSL F N F G +P S RNC+SL
Sbjct: 340 SLPPEINNLTHLEHLQIYSNKFTGHLPRDMCLGGSLLFFAASGNYFTGPIPKSLRNCTSL 399
Query: 1565 QYFSVRRNQLSGNISEDFGVYPHLETMYLMDNKFYGELSLDWGKYLHLTALDFSNNKISG 1386
F + RNQ+SGNISEDFG+YPHL M L DN+ YG+LS W ++ +LT L S NKISG
Sbjct: 400 LRFMLNRNQISGNISEDFGIYPHLYYMDLSDNELYGKLSWKWEQFHNLTTLKISRNKISG 459
Query: 1385 KIPAAIGEASQLQSLHLSSNFLEGSIPTSXXXXXXXXXXXXXXXXLSGEIPQEIGQXXXX 1206
+IPA +G+AS L++L LSSN L G IP L G+I I
Sbjct: 460 EIPAELGKASNLKALDLSSNHLVGQIPIEVGKLKLLELKLSNNRLL-GDISSVIEVLPDV 518
Query: 1205 XXXXXXXXXXXXSIPEEIGHCVQLLDLNLSQNALTGSIPYQMGKMASLATLDLSQNMLAT 1026
IP +IG QLL LNLS+N+ G IP ++G + L +LDLS N L
Sbjct: 519 KKLDLAANNLSGPIPRQIGMHSQLLFLNLSKNSFKGIIPAEIGYLRFLQSLDLSWNSLMG 578
Query: 1025 KIPPELGELRSIEMMNLSHNRIPGSIPSTFDNCFSLVSIDISYNQLEGPLPNITAFQKAP 846
+P ELG L+ +E +N+SHN + G IP+TF + + ++D+S N+LEGP+P+I AF +AP
Sbjct: 579 DLPQELGNLQRLESLNISHNMLSGFIPTTFSSMRGMTTVDVSNNKLEGPIPDIKAFHEAP 638
Query: 845 YDALRNNKDLCGNIAGLKPCTQSMRKKIAQKHXXXXXXXXXXXXXXXXXXXXXXVCVKPR 666
+ A+ NN +LCGN GL+ C + + + V+ R
Sbjct: 639 FQAIHNNTNLCGNATGLEVCETLLGSRTLHRKGKK---------------------VRIR 677
Query: 665 TRHDERKRRESNENVFCIWCFDGKMAYENFIDATQNFNPKHCIGVGAFGSVFRAELPNGQ 486
+R RK ++F IW G++ +E+ I+AT+ FNP HCIG G F +V++A LP G
Sbjct: 678 SR---RKMSMERGDLFSIWGHQGEINHEDIIEATEGFNPSHCIGAGGFAAVYKAALPTGL 734
Query: 485 LFAVKKIHATDDGALRNPKSFASEIRTLTRIRHRSIVKLYGFCSHVQHTFLVYEFLEGRN 306
+ AVKK H + D + K+F SE+ +L IRHR+IVKLYGFCSH +H+FLVYEFLE +
Sbjct: 735 VVAVKKFHQSPDDEMIGLKAFTSEMHSLLGIRHRNIVKLYGFCSHRKHSFLVYEFLERGS 794
Query: 305 LMQVLSNDETTEKFDWIKRENTIKDVSNALSYMHHGCSPPIVHRDISSKNILFDSEYDAY 126
L +L N+E + DW+KR N ++ V+NALSY+HH CSPPIVHRDISS NIL DSEY+A+
Sbjct: 795 LRTILDNEEQAMEMDWMKRINLVRGVANALSYLHHNCSPPIVHRDISSNNILLDSEYEAH 854
Query: 125 ISDFGAARLLSPDSSNWTSFVGTYGYAAPELAYTMEVNEKC 3
+SDFG ARLL PDSSNWTS GT GY APELAYTMEVNEKC
Sbjct: 855 VSDFGTARLLLPDSSNWTSLAGTAGYTAPELAYTMEVNEKC 895
>ref|XP_003616915.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355518250|gb|AES99873.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1190
Score = 749 bits (1935), Expect = 0.0
Identities = 413/894 (46%), Positives = 538/894 (60%), Gaps = 6/894 (0%)
Frame = -3
Query: 2666 AMLETGNEAKALLAWKASLDNDSQWQVLSSWRASTNPCRGGRWFGIQCNKAERXXXXXXX 2487
A + G+EA ALL WK +LD SQ LSSW ++PC W GI C++
Sbjct: 195 ATKDKGSEAIALLNWKTNLDKQSQAS-LSSWTTFSSPCN---WEGIVCDETNSVTIVNVA 250
Query: 2486 XXXIKGTXXXXXXXXXXXXXSIYLPENALYGTIPPSIGNLSRLAFLFMPWNHFSGTIPNE 2307
+KGT ++ + N YG IP IGNLS ++ L M N F+G+IP E
Sbjct: 251 NFGLKGTLFSLNFSSFPMLQTLDISYNFFYGPIPHQIGNLSNISKLKMSHNLFNGSIPQE 310
Query: 2306 IGRLANLRWLNLFNNSFGGSIPQEIGFLSSLTRLDLGHNMLTGSIPISIGNLSDLTFFAL 2127
IG+L NL LN+ GSIP IG L +L LDL N L+G IP SI NL +L L
Sbjct: 311 IGKLRNLNHLNIATCKLIGSIPSTIGMLINLVELDLSANYLSGEIP-SIKNLLNLEKLVL 369
Query: 2126 AQNQLSGHIPLSIVNLTKLNTLFGYENELSGPIPKDIGMLTSLVALELSSNHLTNEIPTS 1947
N LSG IP + ++ L T+ N SG IP IG L +L+ L+LS+N IP++
Sbjct: 370 YGNSLSGPIPFELGTISSLRTIKLLHNNFSGEIPSSIGNLKNLMILQLSNNQFLGSIPST 429
Query: 1946 IANLVRLNSFDIFDNSLIGHMPSSIGNLTSLSVLSLDGNNLSGVIPSEIGKLKKLVYLSL 1767
I NL +L I +N L G +PSSIGNL +L LSL N+LSG IPS G L KL +L L
Sbjct: 430 IGNLTKLIQLSISENKLSGSIPSSIGNLINLERLSLAQNHLSGPIPSTFGNLTKLTFLLL 489
Query: 1766 FSNQLNGVLPADFNNITHLETLQLSFNYLTGNLPQDVCKGGSLNGFLVGYNNFIGTLPIS 1587
++N+LNG +P NNIT+L++LQLS N TG LP +C GGSL F N F G +P S
Sbjct: 490 YTNKLNGSIPKTMNNITNLQSLQLSSNDFTGQLPHQICLGGSLRNFSADKNQFSGFVPRS 549
Query: 1586 SRNCSSLQYFSVRRNQLSGNISEDFGVYPHLETMYLMDNKFYGELSLDWGKYLHLTALDF 1407
+NCSSL ++ N L GNIS+DFGVYP+L + L DN YG++ + K +L L+
Sbjct: 550 LKNCSSLLRLNLAENMLIGNISDDFGVYPNLSYISLSDNFLYGQILPNLVKSHNLIGLEI 609
Query: 1406 SNNKISGKIPAAIGEASQLQSLHLSSNFLEGSIPTSXXXXXXXXXXXXXXXXLSGEIPQE 1227
SNN +SG IP+ +G+A +LQSL LSSN L G IP LSG IP E
Sbjct: 610 SNNNLSGTIPSELGQAPKLQSLQLSSNHLTGKIPKELCYLTSLYELSLSNNKLSGNIPIE 669
Query: 1226 IGQXXXXXXXXXXXXXXXXSIPEEIGHCVQLLDLNLSQNALTGSIPYQMGKMASLATLDL 1047
IG SIP++IG+ ++L++LNLS N IP + ++ L LDL
Sbjct: 670 IGSMQGLQKLNLAANNLSGSIPKQIGNLLKLVNLNLSNNKFMEGIPLEFNRLQYLENLDL 729
Query: 1046 SQNMLATKIPPELGELRSIEMMNLSHNRIPGSIPSTFDNCFSLVSIDISYNQLEGPLPNI 867
N L KIP LG+L+ + +NLSHN + G+IPS F + SL +DISYNQLEG +PN
Sbjct: 730 GGNSLNGKIPESLGKLQKLNTLNLSHNNLYGTIPSNFKDLISLTMVDISYNQLEGSIPNN 789
Query: 866 TAFQKAPYDALRNNKDLCGNIAGLKPCTQSMRKKIAQKHXXXXXXXXXXXXXXXXXXXXX 687
F KAP++ALRNN LCGN +GL PC K+
Sbjct: 790 PVFLKAPFEALRNNTGLCGNASGLVPCNDLSHNNTKSKNKSAKLELCIALIILFLVVFLV 849
Query: 686 XVCVK---PRTRHDERKRRESNE---NVFCIWCFDGKMAYENFIDATQNFNPKHCIGVGA 525
+ P+ R +++ RE E ++F IW +DGKM YEN I+AT++F+ K+ IG G
Sbjct: 850 RGSLHIHLPKARKIQKQAREEQEQTQDIFSIWSYDGKMVYENIIEATEDFDDKYRIGEGG 909
Query: 524 FGSVFRAELPNGQLFAVKKIHATDDGALRNPKSFASEIRTLTRIRHRSIVKLYGFCSHVQ 345
GSV++A LP+GQ+ AVKK+HA DG + N K+F +E++ LT+I+HR+IVKLYGFCSH +
Sbjct: 910 SGSVYKANLPSGQVIAVKKLHAEVDGEMHNFKAFTNEVKALTQIKHRNIVKLYGFCSHPR 969
Query: 344 HTFLVYEFLEGRNLMQVLSNDETTEKFDWIKRENTIKDVSNALSYMHHGCSPPIVHRDIS 165
H F+VY+FLEG +L VLSND F W KR N +K V+NAL +MHHGC+PPIVHRDIS
Sbjct: 970 HAFVVYDFLEGGSLDNVLSNDTQATMFIWKKRVNVVKGVTNALYHMHHGCAPPIVHRDIS 1029
Query: 164 SKNILFDSEYDAYISDFGAARLLSPDSSNWTSFVGTYGYAAPELAYTMEVNEKC 3
SKN+L D + +AYISDFG A++L+ DS N T+F GTYGYAAPELAYT EVNEKC
Sbjct: 1030 SKNVLLDLDCEAYISDFGTAKILNLDSQNSTTFAGTYGYAAPELAYTQEVNEKC 1083