BLASTX nr result

ID: Cephaelis21_contig00019728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019728
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...    82   4e-13
emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]    79   2e-12
emb|CBI37948.3| unnamed protein product [Vitis vinifera]               63   1e-07

>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 114/425 (26%), Positives = 163/425 (38%), Gaps = 23/425 (5%)
 Frame = +1

Query: 37   LRKEFLGSCHNLRPPGLRSTTQCGKLLGFRFHFCFKTKSDLLRASLHSSQXXXXXXXXXX 216
            LR+EFLG  HNLRPPGLRS  +C K + FR            +ASL S            
Sbjct: 33   LRREFLGCGHNLRPPGLRSPKKC-KNIRFRIQ---SPSRFYFKASLGSQPVLVVVAVAAV 88

Query: 217  XXXXXXXXXLNNSKLKTRTQDMQMPGQLAHPLLQHIGSMMNCLFAHESALPANSEGKITI 396
                     L+ S+ +  ++++  P   A   L     +MN  F   + L      K T 
Sbjct: 89   FAFSVVF--LSYSRRRKNSREVSGPSGFAISQLSR--DVMN-QFMESAILGFGDLHKETS 143

Query: 397  DNRLNTRKETSSINVCHEDIVAGMPLGEIKLTNGAAIATTTSEWSNSHMVASVASDSLFT 576
            +       +     V H       P  EI L       T TSE S   +++S A + +  
Sbjct: 144  EKESRATMDIVE-EVSHASKDKEAPWQEIALMQEETHVTNTSESSRLDVLSSNAKNCVSV 202

Query: 577  XXXXXXXXXXXXXXXXXXDIYTSTV-DRRTSEMHLEKCGHETVIDTKKPSLMVETKPCEV 753
                               +    V      E+ LE+   ET       + +V+TK    
Sbjct: 203  RETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPVVQTKSIAA 262

Query: 754  SFPTVDLHRGVTEFTAPDSNKLRESD--------KDNQREELYTFYEA------PMAKLN 891
            S P +    GV E          ES+        +D  REELYTFYEA      PM   N
Sbjct: 263  SVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTIREELYTFYEAKQSVMKPMPNFN 322

Query: 892  GLGALSYGISLHD-KGNSLASKDSAKDEGKIPRSPFSHHADDINYLGG--GLVAYHKDTS 1062
            G+  L+   SL D  G S   +++   E ++        AD   Y+ G   L  Y + +S
Sbjct: 323  GIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSSAD---YVEGKMSLSCYKEGSS 379

Query: 1063 HRKEDMGKRADSAVDKERR--KFSQNTPKDLFPLH---IFEGKHTDGNRASKQFSAYNKL 1227
             ++ D+ K      DK  R    S +     FPL      + K+ D    S++FSAYN+L
Sbjct: 380  GKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKEKYHD----SEKFSAYNRL 435

Query: 1228 LKDGR 1242
            L +GR
Sbjct: 436  LSEGR 440


>emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]
          Length = 1206

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 113/425 (26%), Positives = 163/425 (38%), Gaps = 23/425 (5%)
 Frame = +1

Query: 37   LRKEFLGSCHNLRPPGLRSTTQCGKLLGFRFHFCFKTKSDLLRASLHSSQXXXXXXXXXX 216
            LR+EFLG  HNLRPPGLRS  +C K + FR            +ASL S            
Sbjct: 33   LRREFLGCGHNLRPPGLRSPKKC-KNIRFRIQ---SPSRFYFKASLGSQPVLVVVAVAXV 88

Query: 217  XXXXXXXXXLNNSKLKTRTQDMQMPGQLAHPLLQHIGSMMNCLFAHESALPANSEGKITI 396
                     L+ S+ +  ++++  P   A   L     +MN  F   + L      K T 
Sbjct: 89   FAFSVVF--LSYSRRRKNSREVSGPSGFAISQLSR--DVMN-QFMESAILGFGDLHKETS 143

Query: 397  DNRLNTRKETSSINVCHEDIVAGMPLGEIKLTNGAAIATTTSEWSNSHMVASVASDSLFT 576
            +       +     V H       P  EI L       T TSE S   +++S A + +  
Sbjct: 144  EKESRATMDIVE-EVSHASKDKEAPWQEIALMQEETHVTNTSESSRLDVLSSNAKNCVSV 202

Query: 577  XXXXXXXXXXXXXXXXXXDIYTSTV-DRRTSEMHLEKCGHETVIDTKKPSLMVETKPCEV 753
                               +    V      E+ LE+   ET       + +V+TK    
Sbjct: 203  RETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPVVQTKSIAA 262

Query: 754  SFPTVDLHRGVTEFTAPDSNKLRESD--------KDNQREELYTFYEA------PMAKLN 891
            S P +    GV E          ES+        +D  REELYTFYEA      PM   N
Sbjct: 263  SVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTIREELYTFYEAKQSVMKPMPNFN 322

Query: 892  GLGALSYGISLHD-KGNSLASKDSAKDEGKIPRSPFSHHADDINYLGG--GLVAYHKDTS 1062
            G+  L+   SL D  G S   +++   E ++        AD   Y+ G   L  Y + +S
Sbjct: 323  GIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSSAD---YVEGKMSLSCYKEGSS 379

Query: 1063 HRKEDMGKRADSAVDKERR--KFSQNTPKDLFPLH---IFEGKHTDGNRASKQFSAYNKL 1227
             ++ ++ K      DK  R    S +     FPL      + K+ D    S++FSAYN+ 
Sbjct: 380  GKRNBLVKGKGFPRDKNXRLPPLSDHRNLSQFPLSNGMTVKEKYHD----SEKFSAYNRX 435

Query: 1228 LKDGR 1242
            L +GR
Sbjct: 436  LSEGR 440


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
 Frame = +1

Query: 667  EMHLEKCGHETVIDTKKPSLMVETKPCEVSFPTVDLHRGVTEFTAPDSNKLRESD----- 831
            E+ LE+   ET       + +V+TK    S P +    GV E          ES+     
Sbjct: 669  ELQLEERQMETEFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISFT 728

Query: 832  ---KDNQREELYTFYEA------PMAKLNGLGALSYGISLHD-KGNSLASKDSAKDEGKI 981
               +D  REELYTFYEA      PM   NG+  L+   SL D  G S   +++   E ++
Sbjct: 729  GIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAEL 788

Query: 982  PRSPFSHHADDINYLGG--GLVAYHKDTSHRKEDMGKRADSAVDKERR--KFSQNTPKDL 1149
                    AD   Y+ G   L  Y + +S ++ D+ K      DK  R    S +     
Sbjct: 789  SAQNSHSSAD---YVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQ 845

Query: 1150 FPLH---IFEGKHTDGNRASKQFSAYNKLLKDGR 1242
            FPL      + K+ D    S++FSAYN+LL +GR
Sbjct: 846  FPLSNGMTVKEKYHD----SEKFSAYNRLLSEGR 875


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