BLASTX nr result

ID: Cephaelis21_contig00019488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019488
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|2...   385   e-105
ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|2...   378   e-102
ref|XP_002530980.1| conserved hypothetical protein [Ricinus comm...   359   5e-97
ref|XP_001767294.1| RNA helicase [Physcomitrella patens subsp. p...   194   3e-47
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]   189   7e-46

>ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|222855824|gb|EEE93371.1|
            predicted protein [Populus trichocarpa]
          Length = 773

 Score =  385 bits (989), Expect = e-105
 Identities = 194/322 (60%), Positives = 245/322 (76%), Gaps = 5/322 (1%)
 Frame = +1

Query: 1    YLQPSNWKSNTFQGVIYRVVKSNLVLAEFGEDFYSHHHPDDKYDVKFSFNRVCLKRAHQA 180
            + +PS  K+  +QGVIYRVV+S +VL EFGEDF   HH   +YDV FSFNRVCLKRAHQA
Sbjct: 432  FARPSGQKTEPYQGVIYRVVRSTIVLVEFGEDFLLQHHSTREYDVSFSFNRVCLKRAHQA 491

Query: 181  IAAASDSLFMNLLFPNATPKHELHSAQFFAKNKYELEAF---AIQQILRLQGAPPYLVEG 351
            I AASD  F N LFPN   +  + ++       ++L+A+   A+ +IL  +G PPYLVEG
Sbjct: 492  IEAASDPSFKNFLFPNFVHRKSIPTSTPLHFINHKLDAYQRSAVHEILSFRGPPPYLVEG 551

Query: 352  PLVVE--NKQLSKTGVLIVEATLRILRADRSKKILLCAPVNNTCDMLMRRLKKEMSESDM 525
            PL  +  +KQLS+ G+++ EA L+I ++    +IL+CAP+N TCD+LM+ LK ++ ESDM
Sbjct: 552  PLCSKEYSKQLSRIGLVVQEAVLQIYQSSSKHRILICAPINRTCDVLMQSLKIDIPESDM 611

Query: 526  FRANAAFRELDGVPIDILPSCLYEEEMKCFTCPSLEELKKYKVISSTFMSSFRLYGKGIM 705
            FRANAAFRE+DGVPIDIL SC+Y+ +  CFTCPS+ EL+K++VI STF+SSFRL+ +GI+
Sbjct: 612  FRANAAFREIDGVPIDILTSCVYKRD--CFTCPSIRELRKFRVILSTFVSSFRLHNEGIV 669

Query: 706  AGHFSHIFLVDASSATEPETMVPLANFANDTTIVVVTGAPRNHSGWIRSKIARENGLMTS 885
            AGHFSHIFLV+ASSATEPE MV LAN A++ T V+VTGAP NHSGW+RS IARENGLMTS
Sbjct: 670  AGHFSHIFLVNASSATEPEAMVALANLASENTAVIVTGAPGNHSGWVRSNIARENGLMTS 729

Query: 886  YFERLRDRGLYKKLDPKFIAQL 951
            YFERLRD   Y    PKFI QL
Sbjct: 730  YFERLRDSKPYWNSHPKFIMQL 751


>ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|222852966|gb|EEE90513.1|
            predicted protein [Populus trichocarpa]
          Length = 687

 Score =  378 bits (970), Expect = e-102
 Identities = 191/321 (59%), Positives = 241/321 (75%), Gaps = 4/321 (1%)
 Frame = +1

Query: 1    YLQPSNWKSNTFQGVIYRVVKSNLVLAEFGEDFYSHHHPDDKYDVKFSFNRVCLKRAHQA 180
            + +PS   +   QG+IYRV +S  V+ EFG+DF   HH   KYDV FSFNRVCLKRAH A
Sbjct: 350  FARPSGQMTEPCQGIIYRVERSTRVVVEFGKDFLLQHHSTRKYDVSFSFNRVCLKRAHHA 409

Query: 181  IAAASDSLFMNLLFPNATPKH--ELHSAQFFAKNKYEL-EAFAIQQILRLQGAPPYLVEG 351
            I AASD LF + LFP+   K    + +   F  +K ++ ++ A+++IL  QG PPY+VEG
Sbjct: 410  IEAASDPLFKSFLFPDGVSKKIFPISTPLHFCNHKLDVYQSSAVREILSFQGPPPYIVEG 469

Query: 352  PLVVEN-KQLSKTGVLIVEATLRILRADRSKKILLCAPVNNTCDMLMRRLKKEMSESDMF 528
            PL +    +LS+TG++I EA L+I ++    +IL+CAP+N TCD+LM+ L  ++ +SDMF
Sbjct: 470  PLCLNKFSELSRTGLVIQEAVLQIYQSSSKLRILICAPINRTCDLLMQSLNNDIPKSDMF 529

Query: 529  RANAAFRELDGVPIDILPSCLYEEEMKCFTCPSLEELKKYKVISSTFMSSFRLYGKGIMA 708
            RANAAFRE+DGVPIDILPSC Y+ E  CFTCPSL+EL+K++VI STF+SSFRL  +GI A
Sbjct: 530  RANAAFREIDGVPIDILPSCAYKGE--CFTCPSLQELRKFRVILSTFVSSFRLRNEGIAA 587

Query: 709  GHFSHIFLVDASSATEPETMVPLANFANDTTIVVVTGAPRNHSGWIRSKIARENGLMTSY 888
            GHFSHIFLVDASSATEPE MVPLAN A++ T V+VTGAP NHSGW+RS IAR+NGLMTSY
Sbjct: 588  GHFSHIFLVDASSATEPEAMVPLANLASEETAVIVTGAPGNHSGWVRSNIARKNGLMTSY 647

Query: 889  FERLRDRGLYKKLDPKFIAQL 951
            FERLR    Y+ L PKFI QL
Sbjct: 648  FERLRHSKPYRSLLPKFITQL 668


>ref|XP_002530980.1| conserved hypothetical protein [Ricinus communis]
            gi|223529456|gb|EEF31415.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 710

 Score =  359 bits (922), Expect = 5e-97
 Identities = 188/330 (56%), Positives = 238/330 (72%), Gaps = 13/330 (3%)
 Frame = +1

Query: 1    YLQPSNWKSNTFQGVIYRVVKSNLVLAEFGEDFYSHHHPDDKYDVKFSFNRVCLKRAHQA 180
            + +PS   +  FQG+IYRV +S  VL EFGEDF++ H    KYDV FSFNRVCL+RAHQA
Sbjct: 377  FARPSGSTTEPFQGIIYRVQRSTTVLVEFGEDFHAQHCSFQKYDVSFSFNRVCLRRAHQA 436

Query: 181  IAAASDSLFMNLLFPNATPKHELHSA---QFFAKNKYELEAFAIQQILRLQGAPPYLVEG 351
            I AASD  F N +FP+   +    S+    +  K    L A A+ +I+ +  +PPYL+EG
Sbjct: 437  IEAASDPSFENFIFPSWGLRRLSSSSPNLNYINKLDANLNA-AVHRIITIMESPPYLLEG 495

Query: 352  PLVV----------ENKQLSKTGVLIVEATLRILRADRSKKILLCAPVNNTCDMLMRRLK 501
            P  V           +KQLS TG++I +A  RI R+ +  +IL+CAP+N TCD+LMR LK
Sbjct: 496  PPCVAKVEVKRKECNSKQLSSTGLIIQQAVFRIYRSSQKYRILICAPINRTCDVLMRSLK 555

Query: 502  KEMSESDMFRANAAFRELDGVPIDILPSCLYEEEMKCFTCPSLEELKKYKVISSTFMSSF 681
             E+ ES+MFRANAAFRE+DGVP DIL S LY+ +  CF CP L+EL+K+K+I ST++SSF
Sbjct: 556  -EIPESEMFRANAAFREIDGVPTDILASSLYKGD--CFACPKLQELRKFKIILSTYVSSF 612

Query: 682  RLYGKGIMAGHFSHIFLVDASSATEPETMVPLANFANDTTIVVVTGAPRNHSGWIRSKIA 861
            +L+ +GI AGHFSHIF+VDASSATEPE MV LANFAN+ T V+VTGAPRNHSGW+RS +A
Sbjct: 613  QLHNEGIAAGHFSHIFMVDASSATEPEAMVALANFANEKTTVIVTGAPRNHSGWVRSDLA 672

Query: 862  RENGLMTSYFERLRDRGLYKKLDPKFIAQL 951
            R+NGLM SYFERL +R  YK LDP FI QL
Sbjct: 673  RKNGLMKSYFERLCERTPYKNLDPNFIMQL 702


>ref|XP_001767294.1| RNA helicase [Physcomitrella patens subsp. patens]
            gi|162681549|gb|EDQ67975.1| RNA helicase [Physcomitrella
            patens subsp. patens]
          Length = 885

 Score =  194 bits (493), Expect = 3e-47
 Identities = 117/303 (38%), Positives = 172/303 (56%), Gaps = 3/303 (0%)
 Frame = +1

Query: 1    YLQPSNWKSNTFQGVIYRVVKSNLVLAEFGEDFYSHHHPDDKYDVKFSFNRVCLKRAHQA 180
            Y +PS   +  FQG +++V ++N V   FG+ F      + +YD++FSF RV ++RAHQ 
Sbjct: 310  YARPSGTTATEFQGYVHKV-QANEVHLRFGDAFNKGFISNSRYDIRFSFGRVNIRRAHQG 368

Query: 181  IAAASDSLFMNLLFPNATPKHELHSAQF---FAKNKYELEAFAIQQILRLQGAPPYLVEG 351
            I AA  +L  + LFP         S++    F +     +  A+Q+IL+ +G+PPYL+ G
Sbjct: 369  IQAAK-ALLDSFLFPTTVVPSRTESSKKLTPFNRAANAEQMSAVQEILKKRGSPPYLIYG 427

Query: 352  PLVVENKQLSKTGVLIVEATLRILRADRSKKILLCAPVNNTCDMLMRRLKKEMSESDMFR 531
            P         KT V +VEA L++ RA  + +IL CAP N   D+L+ RL   + + DM R
Sbjct: 428  P-----PGTGKT-VTVVEAMLQVKRAHPNARILACAPSNLASDLLLERLIGSVEKRDMLR 481

Query: 532  ANAAFRELDGVPIDILPSCLYEEEMKCFTCPSLEELKKYKVISSTFMSSFRLYGKGIMAG 711
             NA  R +D VP  I+P C  E +  C   P L  L+KY+++ +T+ S+  L  + +  G
Sbjct: 482  LNAYTRPVDDVPSHIIPFCSIENDFFC--TPGLASLEKYRIVVTTYWSAAMLDAQEVHPG 539

Query: 712  HFSHIFLVDASSATEPETMVPLANFANDTTIVVVTGAPRNHSGWIRSKIARENGLMTSYF 891
            HF+HIFL +A   TEPETMV + N AN  T+VV+ G  +     IRS +A + GL  SY 
Sbjct: 540  HFTHIFLDEAGQGTEPETMVSIGNLANKNTVVVLAGDHQQLGPLIRSPVALKYGLDKSYL 599

Query: 892  ERL 900
            ERL
Sbjct: 600  ERL 602


>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
          Length = 877

 Score =  189 bits (481), Expect = 7e-46
 Identities = 117/321 (36%), Positives = 181/321 (56%), Gaps = 6/321 (1%)
 Frame = +1

Query: 7    QPSNWKSNTFQGVIYRVVKSNLVLAEFGEDFYSHHHPDDKYDVKFSFNRVCLKRAHQAIA 186
            +  N  S  +QG I+RV    + L  F  +F  HH  +  Y+V+F++NRV ++R +QAI 
Sbjct: 305  EDENDSSPPYQGFIHRVEAEQVYLG-FAREFIWHHTDESLYNVRFTYNRVNMRRLYQAID 363

Query: 187  AASDSLFMNLLFPNATPKHELHSAQF--FAKNKYELEAFAIQQILRLQGAPPYLVEGPLV 360
            +A   L M+LLFP+ + +  + +      + N  E + F+I+ IL  +GAPPY++ GP  
Sbjct: 364  SAK-GLEMDLLFPSDSRRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIHGP-- 420

Query: 361  VENKQLSKTGVLIVEATLRILRADRSKKILLCAPVNNTCDMLMRRLKKE----MSESDMF 528
                   KT  L VEA L++    ++ +IL+CAP N+  D L+ RL  E    +  +++F
Sbjct: 421  ---PGTGKTKTL-VEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIF 476

Query: 529  RANAAFRELDGVPIDILPSCLYEEEMKCFTCPSLEELKKYKVISSTFMSSFRLYGKGIMA 708
            R NA  R  + +  D +  C+ E+ +  F CP L +LK+Y++I ST+MS+  LY +G+  
Sbjct: 477  RLNATSRPYEDMNPDFIRFCISEDLI--FKCPPLNDLKRYRIIISTYMSAALLYAEGVKR 534

Query: 709  GHFSHIFLVDASSATEPETMVPLANFANDTTIVVVTGAPRNHSGWIRSKIARENGLMTSY 888
             HFSHI L +A  A+EPETM+PL++     T+VV+ G P      I SK A    L  SY
Sbjct: 535  SHFSHILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSY 594

Query: 889  FERLRDRGLYKKLDPKFIAQL 951
             ERL +   Y K D  ++ +L
Sbjct: 595  LERLFECEFYHKEDENYVTKL 615


Top