BLASTX nr result

ID: Cephaelis21_contig00019466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019466
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabac...   209   2e-51
ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulg...   190   1e-45
ref|YP_173454.1| hypothetical protein NitaMp116 [Nicotiana tabac...   144   8e-32
ref|XP_002516624.1| conserved hypothetical protein [Ricinus comm...    85   5e-27
ref|XP_002333493.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-23

>ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabacum]
            gi|56806655|dbj|BAD83556.1| hypothetical protein
            (mitochondrion) [Nicotiana tabacum]
          Length = 109

 Score =  209 bits (531), Expect = 2e-51
 Identities = 101/109 (92%), Positives = 103/109 (94%)
 Frame = -3

Query: 1343 MLPRRRPTALRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWITGTNVVEWKSRRVT 1164
            MLPRRRPT LRACGVFARRSLPVVPSSPLAVWAGCPSLLRS +LWI GTNVVEW SRRVT
Sbjct: 1    MLPRRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSFKLWIKGTNVVEWNSRRVT 60

Query: 1163 RSTVPRCEVQVVIITPGYALAPLTGTPEPANARENPGRSVLHSSDLRCG 1017
            RSTVPRCEVQVV+ITPGYALAPLTGTPEPANARENPGRSVLHSSD R G
Sbjct: 61   RSTVPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDRRYG 109


>ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulgaris subsp. maritima]
            gi|346683127|ref|YP_004842056.1| hypothetical protein
            BemaM_p008 [Beta macrocarpa] gi|317905687|emb|CBX33234.1|
            hypothetical protein [Beta vulgaris subsp. maritima]
            gi|319439767|emb|CBX33286.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|320147999|emb|CBJ20665.1|
            hypothetical protein [Beta vulgaris subsp. maritima]
            gi|345500045|emb|CBX24861.1| hypothetical protein [Beta
            macrocarpa] gi|384939224|emb|CBL52070.1| hypothetical
            protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 145

 Score =  190 bits (482), Expect = 1e-45
 Identities = 94/114 (82%), Positives = 100/114 (87%), Gaps = 3/114 (2%)
 Frame = -3

Query: 1358 SSLCAMLPRRRPTALRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWITGTNVVEWK 1179
            S    MLPRRRPT LRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWI GTNVV+W 
Sbjct: 11   SGFLPMLPRRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWIRGTNVVKWD 70

Query: 1178 SRRVTRSTVPRCEVQVVIITPGYALAPLTGTPEPANARENPG---RSVLHSSDL 1026
            S+RVTRSTVPRCEVQVV+ITPGYALAPLTGTP PANARENPG    S+L + D+
Sbjct: 71   SKRVTRSTVPRCEVQVVMITPGYALAPLTGTPGPANARENPGLGRSSILPTGDV 124


>ref|YP_173454.1| hypothetical protein NitaMp116 [Nicotiana tabacum]
           gi|56806618|dbj|BAD83519.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 125

 Score =  144 bits (362), Expect = 8e-32
 Identities = 79/128 (61%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
 Frame = +3

Query: 105 MNPQEIELYGNTTFSDLQFMET-TSYFPSTSSADIISSTMSDAESAPPELDQLFLFVEIE 281
           MN +   LYG+ T SDL FM++ TS FPS SS    SST SDA+SAPPEL QLF    I 
Sbjct: 1   MNNRSFRLYGDPTPSDLHFMQSSTSSFPSASST---SSTRSDAQSAPPELTQLF--DGIC 55

Query: 282 KKCEELVLL*NIQLPPEWNMADLIRTVMGNDALQIPGHLQDTYYDVILRGATSWLFEDLG 461
           +K  EL+ L   +LPPEWN+ADLI+ VMG++A  IPGHLQDTYYDV+LRG +SWL EDL 
Sbjct: 56  QKSAELLRLRGRELPPEWNIADLIQAVMGDEAFLIPGHLQDTYYDVLLRGCSSWLLEDLF 115

Query: 462 NFIDLINY 485
           +F+DLINY
Sbjct: 116 HFLDLINY 123


>ref|XP_002516624.1| conserved hypothetical protein [Ricinus communis]
           gi|223544226|gb|EEF45748.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 84.7 bits (208), Expect(2) = 5e-27
 Identities = 40/55 (72%), Positives = 44/55 (80%)
 Frame = +2

Query: 812 ITPVRHEAADAESAPMPLAMPCLVPRHDRGSVTHHEHRAKGRLSNSSEPPYLITT 976
           +  +RHEAAD ESAPMPLAMP LVPRH  GSV  H+HRAKGR SNSS+ PYL TT
Sbjct: 36  VVELRHEAADVESAPMPLAMPYLVPRHGGGSVARHQHRAKGRWSNSSKLPYLTTT 90



 Score = 64.3 bits (155), Expect(2) = 5e-27
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = +3

Query: 678 MTTRNRQIKNFTLNFGPQHPAAHGVLRLVLEMNGEVVE 791
           MTTRN +IKNFTLNF PQHP  HGV R  LEMNGEVVE
Sbjct: 1   MTTRNGKIKNFTLNFKPQHPTTHGVSRSALEMNGEVVE 38


>ref|XP_002333493.1| predicted protein [Populus trichocarpa] gi|222837062|gb|EEE75441.1|
           predicted protein [Populus trichocarpa]
          Length = 62

 Score =  117 bits (292), Expect = 1e-23
 Identities = 55/62 (88%), Positives = 57/62 (91%)
 Frame = +3

Query: 678 MTTRNRQIKNFTLNFGPQHPAAHGVLRLVLEMNGEVVERAEPHIGLLQCGTKPLMPSRLL 857
           MTT+N QIKNFT NFGPQHPAAHGV R VLEMNGEVVERA+PHIGLLQCGTKPL PSRLL
Sbjct: 1   MTTKNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERADPHIGLLQCGTKPLTPSRLL 60

Query: 858 CR 863
           CR
Sbjct: 61  CR 62


Top