BLASTX nr result

ID: Cephaelis21_contig00019462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019462
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]   128   5e-28
ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_003624026.1| Pentatricopeptide repeat-containing protein ...   105   3e-21
ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arab...   100   2e-19

>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/115 (53%), Positives = 80/115 (69%)
 Frame = -1

Query: 350 MLNLSTITRKVTHQNQLKQLHAQLIQNTRHHDAYWVAQLISLCTRLHAPPRYTSRIFYSA 171
           ML L +I  +V + N L+QLHAQ+I N+ HH  YWVA LI+ CTRL APP YT  +F S 
Sbjct: 1   MLELGSIASRVGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNST 60

Query: 170 HQPNVFVFTNMLKYYSQWGTRMDVFSLFDQMQQANIKPDAFVYPLLIKSSGEAGI 6
             PNVFVFT+ML++YS       V  +++QMQ   ++PDAFVYP+LIKS+G  GI
Sbjct: 61  LNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI 115


>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/115 (53%), Positives = 79/115 (68%)
 Frame = -1

Query: 350 MLNLSTITRKVTHQNQLKQLHAQLIQNTRHHDAYWVAQLISLCTRLHAPPRYTSRIFYSA 171
           ML L +I  +V + + L+QLHAQ+I N+ HH  YWVA LI+ CTRL APP YT  +F S 
Sbjct: 1   MLELGSIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNST 60

Query: 170 HQPNVFVFTNMLKYYSQWGTRMDVFSLFDQMQQANIKPDAFVYPLLIKSSGEAGI 6
             PNVFVFT+ML++YS       V  +F+ MQ   ++PDAFVYP+LIKS+G  GI
Sbjct: 61  LNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGI 115


>ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Glycine max]
          Length = 682

 Score =  115 bits (287), Expect = 5e-24
 Identities = 63/116 (54%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
 Frame = -1

Query: 347 LNLSTITRKVTHQNQLKQLHAQLIQNTRHHDAYWVAQLISLCTRLHAPPRYTSRIFYSAH 168
           LN   I  K+T+ + L+QLHAQL+ +++HH  +WVA L++ CT L AP  YTS IF +A 
Sbjct: 4   LNKKNIASKITNLHHLRQLHAQLVLHSQHHHNHWVALLLTQCTHLLAPSNYTSHIFRAAT 63

Query: 167 QPNVFVFTNMLKYYSQWG-TRMDVFSLFDQMQQAN-IKPDAFVYPLLIKSSGEAGI 6
            PNV VFT MLKYYSQ G T   V SLF  MQ  N IKP    YP+LIKS+G+AG+
Sbjct: 64  YPNVHVFTCMLKYYSQIGATTQVVVSLFKHMQYYNDIKPYTSFYPVLIKSAGKAGM 119


>ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360495|gb|ABN08505.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499041|gb|AES80244.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
 Frame = -1

Query: 347 LNLSTITRKVTHQNQLKQLHAQLIQNTRHHDAYWVAQLISLCTRLHAPPRYTSRIFYSAH 168
           LN ++I  K+T+ ++L+QLHAQL+ ++ HH  +WV  L++ CTRL AP  YT  IF++A 
Sbjct: 4   LNNTSIVSKITNLHRLRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAAT 63

Query: 167 QPNVFVFTNMLKYYSQWGTRMDV-FSLFDQM-QQANIKPDAFVYPLLIKSSG 18
            P+V VFT MLKYYSQ G R  V  SLF  M +  NIKP+   Y +++KS+G
Sbjct: 64  HPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAG 115


>ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arabidopsis lyrata subsp.
           lyrata] gi|297335898|gb|EFH66315.1| hypothetical protein
           ARALYDRAFT_888825 [Arabidopsis lyrata subsp. lyrata]
          Length = 790

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 LMLNLSTITRKVTHQNQLKQLHAQLI-QNTRHHDAYWVAQLISLCTRLHAPPRYTSRIFY 177
           L  +L+ I  +     QL Q+HA LI  N+ H  +YW ++LIS CTRL APP Y   +F 
Sbjct: 5   LTASLAAIASQALTFTQLNQIHAHLIVSNSLHRQSYWASRLISCCTRLRAPPYYARLVFD 64

Query: 176 SAHQPNVFVFTNMLKYYSQWGTRMDVFSLFDQMQQANIKPDAFVYPLLIKSSGEAGI 6
           S   PNVF+  +M +Y+SQ     D   L++Q  +  I PD F +P++IKS+G+ G+
Sbjct: 65  SVTFPNVFLVNSMFRYFSQMDMANDALRLYEQRSRCGIMPDTFFFPVVIKSAGKFGV 121


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