BLASTX nr result

ID: Cephaelis21_contig00019420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019420
         (2180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|2...   161   8e-37
emb|CBI26363.3| unnamed protein product [Vitis vinifera]              144   1e-31
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   144   1e-31
ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II su...   140   2e-30
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   138   5e-30

>ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|222863693|gb|EEF00824.1|
            predicted protein [Populus trichocarpa]
          Length = 189

 Score =  161 bits (407), Expect = 8e-37
 Identities = 81/189 (42%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
 Frame = -1

Query: 1634 MLRYIEAVTTVVFPIKNLDKSGIIPKSLVAARLLHHLSNIRAEEDFGYILAVTKLVNIGR 1455
            M   +E  +TV    +NLD++G++P+  +   LL  L +++A +D GY LAVT L +IG+
Sbjct: 1    MFGEVEVCSTVRIIAENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGK 60

Query: 1454 GRPDPSSQYILFPVTFRCRTFLPKNGDIMIGTVYFVTKSGVFLKCGPMSHVYLSARKMPN 1275
            G     S  +LF V F+CRTF+P  G+I+ G V+   + GV L+CGP+ +++LSARKMPN
Sbjct: 61   GEVVNKSGDVLFHVEFKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPN 120

Query: 1274 YSFVDGENPLFLCIDQSRIEKDCVIRFRVFAVRW--RRGDRSRQFKILATIEEASLGPIQ 1101
            Y +   ENP+FL  + +RIE + ++RF V  VRW  +  D  R F +LA++   SLGPI 
Sbjct: 121  YQYTSEENPVFLNDELARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGPIS 180

Query: 1100 SAGSDGRDM 1074
              GSD  D+
Sbjct: 181  LCGSDELDL 189


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  144 bits (362), Expect = 1e-31
 Identities = 75/177 (42%), Positives = 108/177 (61%)
 Frame = -1

Query: 1634 MLRYIEAVTTVVFPIKNLDKSGIIPKSLVAARLLHHLSNIRAEEDFGYILAVTKLVNIGR 1455
            M   ++    V+ P + LD  G++ +  +  RLL   SN +A ++ GY LAVT L NIG 
Sbjct: 66   MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 125

Query: 1454 GRPDPSSQYILFPVTFRCRTFLPKNGDIMIGTVYFVTKSGVFLKCGPMSHVYLSARKMPN 1275
            G+    S  +LFPV F C TF    G+I+ G V+ V K GV L+CGP+ ++YLS +KMP+
Sbjct: 126  GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 185

Query: 1274 YSFVDGENPLFLCIDQSRIEKDCVIRFRVFAVRWRRGDRSRQFKILATIEEASLGPI 1104
            Y +V GENP+FL    S+IEKD V+RF V   +W   +  R+F+ L ++E   LGP+
Sbjct: 186  YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE--REFQALVSLEGDYLGPL 240


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
            vinifera] gi|147822056|emb|CAN61549.1| hypothetical
            protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  144 bits (362), Expect = 1e-31
 Identities = 75/177 (42%), Positives = 108/177 (61%)
 Frame = -1

Query: 1634 MLRYIEAVTTVVFPIKNLDKSGIIPKSLVAARLLHHLSNIRAEEDFGYILAVTKLVNIGR 1455
            M   ++    V+ P + LD  G++ +  +  RLL   SN +A ++ GY LAVT L NIG 
Sbjct: 1    MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60

Query: 1454 GRPDPSSQYILFPVTFRCRTFLPKNGDIMIGTVYFVTKSGVFLKCGPMSHVYLSARKMPN 1275
            G+    S  +LFPV F C TF    G+I+ G V+ V K GV L+CGP+ ++YLS +KMP+
Sbjct: 61   GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120

Query: 1274 YSFVDGENPLFLCIDQSRIEKDCVIRFRVFAVRWRRGDRSRQFKILATIEEASLGPI 1104
            Y +V GENP+FL    S+IEKD V+RF V   +W   +  R+F+ L ++E   LGP+
Sbjct: 121  YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE--REFQALVSLEGDYLGPL 175


>ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
            sativus] gi|449432630|ref|XP_004134102.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
            sativus] gi|449504102|ref|XP_004162253.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
            sativus] gi|449504105|ref|XP_004162254.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
            sativus]
          Length = 190

 Score =  140 bits (352), Expect = 2e-30
 Identities = 78/190 (41%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
 Frame = -1

Query: 1634 MLRYIEAVTTVVFPIKNLDKSGIIPKSLVAARLLHHLSNIRAEEDFGYILAVTKLVNIGR 1455
            M   +E V  V   ++   +     +  +   LL +L   +A +D GY L+VT L +IG+
Sbjct: 1    MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLRSIGK 60

Query: 1454 GRPDPSSQYILFPVTFRCRTFLPKNGDIMIGTVYFVTKSGVFLKCGPMSHVYLSARKMPN 1275
            G     SQ + FP+TF CRTFLP  G+I+ G V  + + G+ LKCGP+ +V+LSARKMP 
Sbjct: 61   GIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYVFLSARKMPT 120

Query: 1274 YSFVDGENPLFLCIDQSRIEKDCVIRFRVFAVRW--RRGDRSRQFKILATIE-EASLGPI 1104
            Y +V GENP+F   + + I  D V+RF V  VRW  +RG   ++F +LA++E   SLGPI
Sbjct: 121  YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 1103 QSAGSDGRDM 1074
              + SD  D+
Sbjct: 181  SLSDSDEFDL 190


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
            sativus] gi|449522228|ref|XP_004168129.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB7-like [Cucumis
            sativus]
          Length = 175

 Score =  138 bits (348), Expect = 5e-30
 Identities = 74/177 (41%), Positives = 107/177 (60%)
 Frame = -1

Query: 1634 MLRYIEAVTTVVFPIKNLDKSGIIPKSLVAARLLHHLSNIRAEEDFGYILAVTKLVNIGR 1455
            M   ++    V+ P +NLD  G++ +  +  RLL   +  +A +D GY LAVT L NIG 
Sbjct: 1    MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60

Query: 1454 GRPDPSSQYILFPVTFRCRTFLPKNGDIMIGTVYFVTKSGVFLKCGPMSHVYLSARKMPN 1275
            G+   +   +LFPV F   TF    G+I+ G V+ V K GVFL+CGP+ ++YLS  KMP+
Sbjct: 61   GKVRQTGD-VLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119

Query: 1274 YSFVDGENPLFLCIDQSRIEKDCVIRFRVFAVRWRRGDRSRQFKILATIEEASLGPI 1104
            Y +V GENP+FL    S+IEKD V+RF V   +W   +  R+F+ L ++E   LGP+
Sbjct: 120  YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAE--REFQALVSLEGDYLGPV 174


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