BLASTX nr result

ID: Cephaelis21_contig00019414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019414
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...    77   3e-12
ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cy...    76   3e-12
dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   3e-12
ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidops...    75   6e-12
ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis ...    75   6e-12

>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541913|gb|EEF43459.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 379

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/45 (82%), Positives = 40/45 (88%), Gaps = 3/45 (6%)
 Frame = -3

Query: 126 YCS---MQVTQADVKLFFESICGEVYRLRLLGDYQHSTRIAFVEF 1
           YC+    +VTQADVKLFFES+CGEVYRLRLLGDY HSTRIAFVEF
Sbjct: 294 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 338



 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -1

Query: 551 EGTRNALSLTGTMLGYYPVRVLPSKTVIAPVNPTFLPR 438
           EG R AL+L GT+LGYYPVRVLPSKT IAPVNPTFLPR
Sbjct: 244 EGARAALNLAGTVLGYYPVRVLPSKTAIAPVNPTFLPR 281


>ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Brachypodium distachyon]
          Length = 328

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 37/45 (82%), Positives = 41/45 (91%), Gaps = 3/45 (6%)
 Frame = -3

Query: 126 YCS---MQVTQADVKLFFESICGEVYRLRLLGDYQHSTRIAFVEF 1
           YC+    +V+QADVKLFFESICGEVYRLRLLGDYQH+TRIAFVEF
Sbjct: 243 YCTNIDRKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEF 287



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -1

Query: 551 EGTRNALSLTGTMLGYYPVRVLPSKTVIAPVNPTFLPR 438
           EG R AL+L+GT+LGYYPVRVLPSKT IAPVNPTFLPR
Sbjct: 193 EGARAALTLSGTVLGYYPVRVLPSKTAIAPVNPTFLPR 230


>dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 324

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 37/45 (82%), Positives = 41/45 (91%), Gaps = 3/45 (6%)
 Frame = -3

Query: 126 YCS---MQVTQADVKLFFESICGEVYRLRLLGDYQHSTRIAFVEF 1
           YC+    +V+QADVKLFFESICGEVYRLRLLGDYQH+TRIAFVEF
Sbjct: 239 YCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEF 283



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -1

Query: 551 EGTRNALSLTGTMLGYYPVRVLPSKTVIAPVNPTFLPR 438
           EG R AL+L+GT+LGYYPVRVLPSKT IAPVNPTFLPR
Sbjct: 189 EGARAALTLSGTVLGYYPVRVLPSKTAIAPVNPTFLPR 226


>ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
           gi|332193409|gb|AEE31530.1| CTC-interacting domain 11
           protein [Arabidopsis thaliana]
          Length = 406

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 36/45 (80%), Positives = 40/45 (88%), Gaps = 3/45 (6%)
 Frame = -3

Query: 126 YCS---MQVTQADVKLFFESICGEVYRLRLLGDYQHSTRIAFVEF 1
           YC+    +VTQ+DVK+FFES CGEVYRLRLLGDYQHSTRIAFVEF
Sbjct: 273 YCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEF 317



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 551 EGTRNALSLTGTMLGYYPVRVLPSKTVIAPVNPTFLPR 438
           EG   AL+L+GTMLG+YPV+VLPSKT IAPVNPTFLPR
Sbjct: 223 EGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 260


>ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
           gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17
           [Arabidopsis thaliana] gi|332193408|gb|AEE31529.1|
           CTC-interacting domain 11 protein [Arabidopsis thaliana]
          Length = 358

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 36/45 (80%), Positives = 40/45 (88%), Gaps = 3/45 (6%)
 Frame = -3

Query: 126 YCS---MQVTQADVKLFFESICGEVYRLRLLGDYQHSTRIAFVEF 1
           YC+    +VTQ+DVK+FFES CGEVYRLRLLGDYQHSTRIAFVEF
Sbjct: 273 YCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEF 317



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 551 EGTRNALSLTGTMLGYYPVRVLPSKTVIAPVNPTFLPR 438
           EG   AL+L+GTMLG+YPV+VLPSKT IAPVNPTFLPR
Sbjct: 223 EGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 260


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