BLASTX nr result

ID: Cephaelis21_contig00019246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019246
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   145   1e-32
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   143   6e-32
ref|XP_002879982.1| zinc finger family protein [Arabidopsis lyra...   137   3e-30
ref|NP_181765.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis ...   127   4e-27
emb|CBI21948.3| unnamed protein product [Vitis vinifera]              126   8e-27

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  145 bits (367), Expect = 1e-32
 Identities = 104/248 (41%), Positives = 123/248 (49%), Gaps = 7/248 (2%)
 Frame = +3

Query: 207 MSSSDEDYYPFWHHKKSNYDMNSKIMLTAIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 386
           + +  ED   F H  +  YD+NSKIML AI                              
Sbjct: 25  LENEGEDSPLFVH--RDTYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERAN 82

Query: 387 XXXXXXXXHAHLHSSEPSHRGLDPSIIASLPKFVFKR-RGDAKGVNSGETECSVCLSSLD 563
                        +SEP   GLDP +IASLP FV+K+  GD +     + EC+VCLS L 
Sbjct: 83  IRRLGLATA----TSEPPKTGLDPVVIASLPIFVYKQSNGDQE---DNDQECAVCLSVLQ 135

Query: 564 DGEMARKLPNCGHIFHAECVDKWLSSQPTCPICRSDAEPRPGWAVQPEPREGAVGVPVPI 743
           D EMAR LPNC H FHAEC+DKWL+S  TCPICR++AEPR    +QPEPREG    PVP 
Sbjct: 136 DQEMARSLPNCKHTFHAECIDKWLTSHSTCPICRTEAEPR----IQPEPREG----PVPA 187

Query: 744 G--PTAPPLESAAAMEGTSHG---SARINGXXXXXXXXXXXXXXXWDRSSKRIQHSGQEC 908
           G   TAPPLE     EGTS     S+                    +RSS+RIQ   QE 
Sbjct: 188 GGAATAPPLEQVGT-EGTSESGNQSSSNKASGSISRLSSFRRILSRERSSRRIQSETQEQ 246

Query: 909 P-EDLERQ 929
             EDLERQ
Sbjct: 247 GLEDLERQ 254


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  143 bits (361), Expect = 6e-32
 Identities = 95/252 (37%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
 Frame = +3

Query: 201 PTMSSSDEDYYPFWHHKKSNYDMNSKIMLTAIIXXXXXXXXXXXXXXXXXXXXXXXXXXX 380
           P  S  D+D   +    KS+ D+NSKIMLTAI+                           
Sbjct: 6   PLSSDDDDDNGSYTTSHKSSSDLNSKIMLTAIVSLSVVIALVITLHIYARCVLRRRARRR 65

Query: 381 XXXXXXXXXXHAHLHSSEPSHRGLDPSIIASLPKFVFKRRGDAKGVNSGETECSVCLSSL 560
                      + +HS EP   GLD S+I SLP F F      +    G T+C+VCLS L
Sbjct: 66  SALLSITL---SRVHSDEPPKTGLDQSVIDSLPMFKFSENDTQE--EGGTTDCAVCLSVL 120

Query: 561 DDGEMARKLPNCGHIFHAECVDKWLSSQPTCPICRSDAEPRPGWAVQPEPREGAVGV-PV 737
           ++GE+AR LPNC H FHAEC+DKWL +  TCPICR++AEPR    +QPEPRE  V +  V
Sbjct: 121 EEGEIARLLPNCKHTFHAECIDKWLGTHSTCPICRTEAEPR----LQPEPREAMVMIRTV 176

Query: 738 PIGPTAPPLE-----SAAAMEGTSHGSARINGXXXXXXXXXXXXXXXWDRSSKRIQHS-- 896
           P  P APP +     S A  EGTS G+A+ +                  R S R   S  
Sbjct: 177 PPAP-APPSDGTNSSSLACSEGTSEGAAQCSAKSGASTSRLSSFRRMLSRGSSRTTQSCG 235

Query: 897 -GQECPEDLERQ 929
             ++  ED+ER+
Sbjct: 236 APEDGIEDVERR 247


>ref|XP_002879982.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325821|gb|EFH56241.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score =  137 bits (346), Expect = 3e-30
 Identities = 96/255 (37%), Positives = 121/255 (47%), Gaps = 15/255 (5%)
 Frame = +3

Query: 207 MSSSDEDYYPFW----HHK----KSNYDMNSKIMLTAIIXXXXXXXXXXXXXXXXXXXXX 362
           MSS+D D  P W    HH      S+YD+NSKIML A+                      
Sbjct: 1   MSSNDRD--PHWFNSQHHSFWPNPSSYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR 58

Query: 363 XXXXXXXXXXXXXXXXHAHLHSSEPSHRGLDPSIIASLPKFVFKRRGDAKGVNSGETECS 542
                               HS E   RGL+P++IASLP F  +      GV +  TEC+
Sbjct: 59  RRREAFRGLPVVFR------HSFEMPKRGLNPAVIASLPTFTVRT---TDGVATSATECA 109

Query: 543 VCLSSLDDGEMARKLPNCGHIFHAECVDKWLSSQPTCPICRSDAEPRPGWAVQPEPREGA 722
           VCLS L++ + AR+LPNC HIFH +CVD WL++ PTCP+CR++ EPRP   ++PEPREG 
Sbjct: 110 VCLSVLEEQDTARELPNCKHIFHVDCVDTWLTTCPTCPVCRTEVEPRP--RLEPEPREGP 167

Query: 723 VGVPVPIGPTAPPLESAAAME-----GTSHGSARINGXXXXXXXXXXXXXXXWDRSSKRI 887
           VG       TAPPL     +      GTS  S                     +RSS RI
Sbjct: 168 VG-------TAPPLLEETRLNLTVEAGTSSSSDNKTVASSASRLNSFRKILTRERSSNRI 220

Query: 888 QHS--GQECPEDLER 926
            HS   Q+   DLER
Sbjct: 221 NHSCVDQDRVADLER 235


>ref|NP_181765.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
           gi|68565335|sp|Q9SLC3.1|ATL41_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL41; AltName: Full=RING-H2
           finger protein ATL41 gi|4567308|gb|AAD23719.1| putative
           RING zinc finger protein [Arabidopsis thaliana]
           gi|18491287|gb|AAL69468.1| At2g42360/MHK10.8
           [Arabidopsis thaliana] gi|70905063|gb|AAZ14057.1|
           At2g42360 [Arabidopsis thaliana]
           gi|110736438|dbj|BAF00187.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|330255017|gb|AEC10111.1| E3 ubiquitin-protein ligase
           ATL41 [Arabidopsis thaliana]
          Length = 236

 Score =  127 bits (320), Expect = 4e-27
 Identities = 91/253 (35%), Positives = 119/253 (47%), Gaps = 13/253 (5%)
 Frame = +3

Query: 207 MSSSDEDY-------YPFWHHKKSNYDMNSKIMLTAIIXXXXXXXXXXXXXXXXXXXXXX 365
           MSS+D D+       + FW +  S YD+NSKIML A+                       
Sbjct: 1   MSSNDRDHRRFNSDHHSFWPNP-STYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRR 59

Query: 366 XXXXXXXXXXXXXXXHAHLHSSEPSHRGLDPSIIASLPKFVFKRRGDAKGVNSGETECSV 545
                              H  E   RGL+P++IASLP F     G   GV +  TEC+V
Sbjct: 60  RREAFRGLPVIFR------HPFEMPKRGLNPTVIASLPTFTV---GATDGVAASATECAV 110

Query: 546 CLSSLDDGEMARKLPNCGHIFHAECVDKWLSSQPTCPICRSDAEPRPGWAVQPEPREGAV 725
           CLS L + + AR+LPNC HIFH +CVD WL++  TCP+CR++ EPRP   ++PEPREG V
Sbjct: 111 CLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRP--RLEPEPREGPV 168

Query: 726 G-VPVPIGPTAPPLESAAAMEGTSHGSARINGXXXXXXXXXXXXXXXWDRSSKRIQHSGQ 902
           G  P  +  T   L   AA   +S     ++                 +RSS RI HS  
Sbjct: 169 GTAPQLLVETRLNLTVEAASSSSSDNKTVVSPASRLNSFRKILTR---ERSSNRINHS-- 223

Query: 903 ECPE-----DLER 926
            CP+     DLER
Sbjct: 224 -CPDQDRVADLER 235


>emb|CBI21948.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  126 bits (317), Expect = 8e-27
 Identities = 76/174 (43%), Positives = 97/174 (55%), Gaps = 9/174 (5%)
 Frame = +3

Query: 435 PSHRGLDPSIIASLPKFVFKRRGDAKGVNSGETECSVCLSSLDDGEMARKLPNCGHIFHA 614
           P   GLD S+I SLP F F      +    G T+C+VCLS L++GE+AR LPNC H FHA
Sbjct: 9   PPKTGLDQSVIDSLPMFKFSENDTQE--EGGTTDCAVCLSVLEEGEIARLLPNCKHTFHA 66

Query: 615 ECVDKWLSSQPTCPICRSDAEPRPGWAVQPEPREGAVGV-PVPIGPTAPPLE-----SAA 776
           EC+DKWL +  TCPICR++AEPR    +QPEPRE  V +  VP  P APP +     S A
Sbjct: 67  ECIDKWLGTHSTCPICRTEAEPR----LQPEPREAMVMIRTVPPAP-APPSDGTNSSSLA 121

Query: 777 AMEGTSHGSARINGXXXXXXXXXXXXXXXWDRSSKRIQHS---GQECPEDLERQ 929
             EGTS G+A+ +                  R S R   S    ++  ED+ER+
Sbjct: 122 CSEGTSEGAAQCSAKSGASTSRLSSFRRMLSRGSSRTTQSCGAPEDGIEDVERR 175


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