BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019214
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...   100   2e-19
ref|NP_188429.1| pentatricopeptide repeat-containing protein [Ar...    99   3e-19
ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19

>ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|222869094|gb|EEF06225.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/127 (48%), Positives = 79/127 (62%)
 Frame = -3

Query: 382 RLISPPKPPLNPITISAPLSFFSTFIHQDHHFHNSNLQSQDKINFESLTDHSYWTKRIHK 203
           +L  P KP L+P      LSF ST         N   QS        +T+ SYWT++IH 
Sbjct: 11  KLSIPFKPKLSP------LSFLSTHPQNQEQALNHQQQSI------CITNRSYWTQKIHD 58

Query: 202 LCTVDRNVDSALDLLNHICLHGYLLNALNISSIIHGLCDAGRFSEAHNQLLLFINSHQFN 23
           LCT  RNVD AL LL+H+ L GYL ++LN+SSIIHGLCDA RF+EAH +L++F+ S    
Sbjct: 59  LCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTS--LC 116

Query: 22  ILDERTC 2
           + DERTC
Sbjct: 117 VPDERTC 123


>ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 681

 Score =  102 bits (253), Expect = 4e-20
 Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
 Frame = -3

Query: 397 HR-MSLRLISPPKPPLNPITISAPLSFFSTFIHQDHHFHNSNLQSQDKINFESLTDHSYW 221
           HR +S++++S        IT S  + F  T   Q  H  N +  S++    ES+ D SYW
Sbjct: 6   HRSLSIKIVS--------ITPSISILFTRTANFQRLHPENGS-DSREWAPEESVADVSYW 56

Query: 220 TKRIHKLCTVDRNVDSALDLLNHICLHGYLLNALNISSIIHGLCDAGRFSEAHNQLLLFI 41
           TK+IH LCT DRNVD AL LL+ + LHGY  + LN++S+IHGLCDA RF EAH + +L I
Sbjct: 57  TKKIHGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASVIHGLCDAHRFHEAHCRFMLSI 116

Query: 40  NSHQFNILDERTC 2
            S    + DERTC
Sbjct: 117 ASR--CVPDERTC 127


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
 Frame = -3

Query: 361 PPLNPITISAPLSFFSTFIHQDHHFHNSNLQSQDKINFE-----SLTDHSYWTKRIHKLC 197
           PP+     S PL+F ST  H+ +H      +   ++  E     S+T+ SYWTK+IH LC
Sbjct: 10  PPILLKPSSVPLTFLSTH-HRPYHEVLLPQEQYQQLQQEQEQPISITNSSYWTKKIHLLC 68

Query: 196 TVDRNVDSALDLLNHICLHGYLLNALNISSIIHGLCDAGRFSEAHNQLLLFINSHQFNIL 17
           T  R VD AL LL+H+ L GY  ++LN SSIIH LCDA RF EAH++ LL I S    + 
Sbjct: 69  TQQRKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCIASD--CVP 126

Query: 16  DERTC 2
           DERTC
Sbjct: 127 DERTC 131


>ref|NP_188429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274006|sp|Q9LSK8.1|PP240_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g18020 gi|11994208|dbj|BAB01330.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642514|gb|AEE76035.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 688

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/117 (44%), Positives = 70/117 (59%)
 Frame = -3

Query: 352 NPITISAPLSFFSTFIHQDHHFHNSNLQSQDKINFESLTDHSYWTKRIHKLCTVDRNVDS 173
           N    S  LSF S  + +       +   + +    S+TD +YW +RIH +C V RN D 
Sbjct: 14  NGFFFSKSLSFSSASVLKSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDE 73

Query: 172 ALDLLNHICLHGYLLNALNISSIIHGLCDAGRFSEAHNQLLLFINSHQFNILDERTC 2
           AL +L+ +CL GY  ++LN+SS+IH LCDAGRF EAH + LLF+ S    I DERTC
Sbjct: 74  ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG--FIPDERTC 128


>ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 646

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = -3

Query: 247 ESLTDHSYWTKRIHKLCTVDRNVDSALDLLNHICLHGYLLNALNISSIIHGLCDAGRFSE 68
           ES+ D SYWTK+IH LCT DRNVD AL LL+ + LHGY  + LN++S+IHGLCDA RF E
Sbjct: 15  ESVADVSYWTKKIHGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASVIHGLCDAHRFHE 74

Query: 67  AHNQLLLFINSHQFNILDERTC 2
           AH + +L I S    + DERTC
Sbjct: 75  AHCRFMLSIASR--CVPDERTC 94