BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019159
         (4369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   685   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   682   0.0  
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   678   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              677   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   677   0.0  

>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  685 bits (1768), Expect(2) = 0.0
 Identities = 332/393 (84%), Positives = 354/393 (90%)
 Frame = +3

Query: 1770 ALDTLGSIKWRINKRVLSVIDRIWASGGRLGDLIDRNDITLPEQPDTEDETVLXXXXXXX 1949
            AL+TLG+ KWRINKR+  V+DRIWA GG L DL+DRND+ LPE+PDTEDE  L       
Sbjct: 515  ALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKV 574

Query: 1950 XXXXXENSERHSQRCDIELKLAVARKMKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDIC 2129
                  NSERHSQRCDIELKLAVARKMKDE GFFYPHNLDFRGRAYPMHP+LNHLGSD+C
Sbjct: 575  KSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLC 634

Query: 2130 RGLLEFAEGRPLGKSGLKWLKIHLANLFANGVDKLSHEARIAFVENHMEDIFDSADRPLE 2309
            RG+LEFAEGRPLG SGL WLKIHLANLFA GVDKLSHE RI F ENH++DIFDSADRPLE
Sbjct: 635  RGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLE 694

Query: 2310 GKRWWLNAEDPFQFLAVSINLSEALRSESPETTISHIPVHQDGSCNGLQHYAALGRDKLG 2489
            GKRWWLNAEDPFQFLA  INLSEALRS SPETTISHIPVHQDGSCNGLQHYAALGRD+LG
Sbjct: 695  GKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLG 754

Query: 2490 ATSVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPAVYPDALQARALISQVDRKLVKQTV 2669
            AT+VNLVAGEKPADVYSGIAARVLDIMKRDA+KDPA++PDAL+AR LI+QVDRKLVKQTV
Sbjct: 755  ATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTV 814

Query: 2670 MTSVYGVTYIGARDQIKRRLKERGAFADDKELFRAACYAAKITLTALGEMFEAARSIMGW 2849
            MTSVYGVTYIGARDQIKRRLKER A ADD ELF AACYAAKITLTALGEMF+AARSIM W
Sbjct: 815  MTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSW 874

Query: 2850 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKIG 2948
            LGDCAK+IASEN PVRWTTPLGLPVVQPYRK+G
Sbjct: 875  LGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG 907



 Score =  573 bits (1476), Expect(2) = 0.0
 Identities = 305/505 (60%), Positives = 358/505 (70%), Gaps = 12/505 (2%)
 Frame = +1

Query: 217  MSSTKSPIY-VNIKVDQFNSPAIYQPTIFLSKPPKLSQVMWRNLAKHVSSKTTLAPR--- 384
            MSS K+PI   N+  D     +  +PT F   P K   VMWRN+AK    +   APR   
Sbjct: 1    MSSGKTPILSANLGRDLDLIISFEKPTNFRPNPLKKPTVMWRNIAKRAIPR---APRKCV 57

Query: 385  ------FSRAYSFLGFCPDSVSSEKSKFRSFYLSSCSGIGFFEPGFRIVGQFSTRDDILG 546
                   SR YSFLGF  D +  E  KF +F  SSCS  GF E GFR +G+ S+R+D +G
Sbjct: 58   YLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVG 117

Query: 547  RPSLHFARNQVNINGLCQKXXXXXXXXXXXXXXXXEDEAIVGDEVQILLAEMKKENRKNL 726
            RPS    RNQ+  +G C K                E++    DE+Q LL EMKKE ++ +
Sbjct: 118  RPSFGCLRNQMGFSGFCPKSYASVAEAVSSTDV--EEDVSASDEIQELLGEMKKEEKRQV 175

Query: 727  ELQRRSRFKTAYGMGWRKYQALKRRQVKIETEAWEQAAKEYTELLHDMCEHKLAPNLPYM 906
              +RR + K   GM   +Y  L+RRQVKIETEAWE AAKEY ELL DMCE KLAPNLPYM
Sbjct: 176  NFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYM 235

Query: 907  KSLFLGWFEPLCGKIAEEQELCMQGKLKAAYAKYLIQLPADMISVITMHKLMGLLMTGGE 1086
            KSLFLGWFEPL   I +EQELC  GK KAAYA Y  QLPADM+SVITMHKL+GLLMTGGE
Sbjct: 236  KSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGE 295

Query: 1087 HGTARVVQAACLIGDAVEQEVRIHKFLEKTKKQRVKEDEILEGDVTSDVTQEQEKLRKTV 1266
            HG+ RVVQAAC+IGDA+EQEVRIH FLEKTK+++V +D+ +EG     V  EQEKLRK V
Sbjct: 296  HGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKV 355

Query: 1267 TNLMKKQKLRAVQQIVKAQDESGPWGTDAKAKVGSHLLDLLLQTAYIQSPAD-ELADCPP 1443
            TNLMKKQKL A +QIVK  D S PWG +AKAKVGS L++LL+QTAYIQ P D +LAD PP
Sbjct: 356  TNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPP 415

Query: 1444 DIRPAFIHTSRTVKNQANG-SRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTG 1620
            DIRPAF+HT +TV  +A    RR+G+I+CDPLV KGLERTARHMVIPY+PMLVPP+KWTG
Sbjct: 416  DIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTG 475

Query: 1621 YDKGGHLYLPSYVMRTHGAKQQREA 1695
            YDKG HL+LPSYVMRTHGA+QQREA
Sbjct: 476  YDKGAHLFLPSYVMRTHGARQQREA 500



 Score =  231 bits (589), Expect = 1e-57
 Identities = 107/125 (85%), Positives = 118/125 (94%)
 Frame = +1

Query: 3034 IKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSY 3213
            IKTSLQVLTLQRETE +MVKRQRTAFPPNFVHSLDGSHMMMTA+AC+KAGLNFAGVHDSY
Sbjct: 911  IKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSY 970

Query: 3214 WTHACDVDQMNTILREKFVELYEAPILENLLEGFQKTLPSLSFPALPERGDFDLKDVLES 3393
            WTHACDVD+MN +LREKFV+LYE PILENLLE FQ++ P+L FP LPERGDFDL++VLES
Sbjct: 971  WTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLES 1030

Query: 3394 PYFFN 3408
            PYFFN
Sbjct: 1031 PYFFN 1035


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  682 bits (1760), Expect(2) = 0.0
 Identities = 332/393 (84%), Positives = 357/393 (90%)
 Frame = +3

Query: 1770 ALDTLGSIKWRINKRVLSVIDRIWASGGRLGDLIDRNDITLPEQPDTEDETVLXXXXXXX 1949
            ALDTLGS KWRINKRVLSVIDRIWA GGRL DL+DR+D  LPE+PDTEDE +        
Sbjct: 501  ALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKV 560

Query: 1950 XXXXXENSERHSQRCDIELKLAVARKMKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDIC 2129
                 EN ERHSQRCDIELKLAVARKMKDE GFFYPHN+DFRGRAYPMHPHLNHLGSDIC
Sbjct: 561  KSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDIC 620

Query: 2130 RGLLEFAEGRPLGKSGLKWLKIHLANLFANGVDKLSHEARIAFVENHMEDIFDSADRPLE 2309
            RG+L FAEGRPLG+SGL+WLKIHLANLFA GV+KLS E RIAF ENHM+DIFDSAD+PLE
Sbjct: 621  RGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLE 680

Query: 2310 GKRWWLNAEDPFQFLAVSINLSEALRSESPETTISHIPVHQDGSCNGLQHYAALGRDKLG 2489
            G+RWWLNAEDPFQ LAV INLSEA+RS SPET+ISHIPVHQDGSCNGLQHYAALGRD+LG
Sbjct: 681  GRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELG 740

Query: 2490 ATSVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPAVYPDALQARALISQVDRKLVKQTV 2669
            A +VNLVAGEKPADVYSGIAARVLDIMKRDAQ+DPA +PDA++ARAL++QVDRKLVKQTV
Sbjct: 741  AAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTV 800

Query: 2670 MTSVYGVTYIGARDQIKRRLKERGAFADDKELFRAACYAAKITLTALGEMFEAARSIMGW 2849
            MTSVYGVTYIGARDQIKRRLKERGA ADD ELF AACYAAK+TLTALGEMFEAARSIM W
Sbjct: 801  MTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTW 860

Query: 2850 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKIG 2948
            LG+CAK+IASEN PVRWTTPLGLPVVQPYRKIG
Sbjct: 861  LGECAKIIASENEPVRWTTPLGLPVVQPYRKIG 893



 Score =  598 bits (1543), Expect(2) = 0.0
 Identities = 325/498 (65%), Positives = 370/498 (74%), Gaps = 5/498 (1%)
 Frame = +1

Query: 217  MSSTKSPIYVNIKVDQFNSPAIYQPTIFLSKPPKLSQVMWRNLAKHVSSKTTLAPRFS-- 390
            MSSTK+PI + IK++QF      +PT         S +MWRN+ K +SS+T     FS  
Sbjct: 1    MSSTKTPISLTIKLNQFTD----KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSK 56

Query: 391  -RAYSFLGFCPDSVSSEKSKFRSFYLSSCSGIGFFEPGFRIVGQFSTRDDILGRPSLHFA 567
             R YSFLGF  DSV  + +KFRS    SCS I     GF+ +G++   D+ L RP L   
Sbjct: 57   NRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIVM---GFQNLGEYLPGDEFLSRPLL--- 110

Query: 568  RNQVNINGLC-QKXXXXXXXXXXXXXXXXEDEAIVGDEVQILLAEMKKENRKNLELQRRS 744
            +NQVN N  C +K                E++  V DEVQ LL E+KKE +K    +RR 
Sbjct: 111  KNQVNSNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRK 170

Query: 745  RFKTAYGMGWRKYQALKRRQVKIETEAWEQAAKEYTELLHDMCEHKLAPNLPYMKSLFLG 924
            +     GMG RKYQ LKRRQVK+ETEAWEQAAKEY ELL DMCE KLAPNLPY+KSLFLG
Sbjct: 171  QRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLG 230

Query: 925  WFEPLCGKIAEEQELCMQGKLKAAYAKYLIQLPADMISVITMHKLMGLLMTGGEHGTARV 1104
            WFEPL  KIAEEQELC QGK KAAYAKYL QLPADM++VITMHKLMGLLMTGG+HGTARV
Sbjct: 231  WFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARV 290

Query: 1105 VQAACLIGDAVEQEVRIHKFLEKTKKQRVKEDEILEGDVTSDVTQEQEKLRKTVTNLMKK 1284
            VQAA +IGDA+EQEVRIH FLEKTKKQ+ ++D+  E      VTQEQEKLRK VTNLMKK
Sbjct: 291  VQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDG--EHVTQEQEKLRKKVTNLMKK 348

Query: 1285 QKLRAVQQIVKAQDESGPWGTDAKAKVGSHLLDLLLQTAYIQSPADELADCPPDIRPAFI 1464
            QKLRAV QIV+ QD+S PWG DAKAKVGS L++LLLQTAYIQ PA++LA  PPDIRPAF+
Sbjct: 349  QKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFL 408

Query: 1465 HTSRTV-KNQANGSRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL 1641
            H+ RTV K   + SRRYGIIQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL
Sbjct: 409  HSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL 468

Query: 1642 YLPSYVMRTHGAKQQREA 1695
            YLPSYVMRTHGA+QQREA
Sbjct: 469  YLPSYVMRTHGARQQREA 486



 Score =  229 bits (585), Expect = 4e-57
 Identities = 108/125 (86%), Positives = 117/125 (93%)
 Frame = +1

Query: 3034 IKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSY 3213
            IKTSLQ+LTLQ+ETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVACR+AGLNFAGVHDSY
Sbjct: 897  IKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSY 956

Query: 3214 WTHACDVDQMNTILREKFVELYEAPILENLLEGFQKTLPSLSFPALPERGDFDLKDVLES 3393
            WTHACDVD++N ILREKFVELYE PILE LLE FQ + P+L FP LPERGDFDL+DVLES
Sbjct: 957  WTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLES 1016

Query: 3394 PYFFN 3408
            PYFFN
Sbjct: 1017 PYFFN 1021


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  678 bits (1749), Expect(2) = 0.0
 Identities = 327/393 (83%), Positives = 355/393 (90%)
 Frame = +3

Query: 1770 ALDTLGSIKWRINKRVLSVIDRIWASGGRLGDLIDRNDITLPEQPDTEDETVLXXXXXXX 1949
            ALDTLG+ KWRINKRVLSV+DRIWA GGRL DL+DR+D  LPE+PDTEDE +        
Sbjct: 500  ALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKV 559

Query: 1950 XXXXXENSERHSQRCDIELKLAVARKMKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDIC 2129
                 EN ERHSQRCDIELKLAVARKMKDE  FFYPHN+DFRGRAYPMHPHLNHLGSDIC
Sbjct: 560  KSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDIC 619

Query: 2130 RGLLEFAEGRPLGKSGLKWLKIHLANLFANGVDKLSHEARIAFVENHMEDIFDSADRPLE 2309
            RG+LEFAEGRPLG+SGL+WLKIHLANLFA GV+KLS E RI F ENHM+DIFDS+D+PLE
Sbjct: 620  RGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLE 679

Query: 2310 GKRWWLNAEDPFQFLAVSINLSEALRSESPETTISHIPVHQDGSCNGLQHYAALGRDKLG 2489
            G+RWWLNAEDPFQ LAV INLSEA+RS SPET++SHIPVHQDGSCNGLQHYAALGRDKLG
Sbjct: 680  GRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLG 739

Query: 2490 ATSVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPAVYPDALQARALISQVDRKLVKQTV 2669
            A +VNLVAGEKPADVYSGIAARVLDIMKRDAQ+DPA +PDA++AR L++QVDRKLVKQTV
Sbjct: 740  AAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTV 799

Query: 2670 MTSVYGVTYIGARDQIKRRLKERGAFADDKELFRAACYAAKITLTALGEMFEAARSIMGW 2849
            MTSVYGVTYIGARDQIKRRLKERGA ADD ELF AACYAAK+TLTALGEMFEAARSIM W
Sbjct: 800  MTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTW 859

Query: 2850 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKIG 2948
            LG+CAK+IASEN PVRWTTPLGLPVVQPYRKIG
Sbjct: 860  LGECAKIIASENEPVRWTTPLGLPVVQPYRKIG 892



 Score =  601 bits (1550), Expect(2) = 0.0
 Identities = 322/497 (64%), Positives = 369/497 (74%), Gaps = 4/497 (0%)
 Frame = +1

Query: 217  MSSTKSPIYVNIKVDQFNSPAIYQPTIFLSKPPKLSQVMWRNLAKHVSSKTTLAPRFS-- 390
            MSSTK+PI + IK++QF      +PT     P   S +MWRN+ K +SS+T     FS  
Sbjct: 1    MSSTKTPISLTIKLNQFTD----KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSK 56

Query: 391  -RAYSFLGFCPDSVSSEKSKFRSFYLSSCSGIGFFEPGFRIVGQFSTRDDILGRPSLHFA 567
             R YSFLGF  DS+  + +KFRS    SCS I     GF+ +G++   D+ L RP +   
Sbjct: 57   NRTYSFLGFGQDSIFKDNTKFRSLIPISCSNIVM---GFQNLGEYLPGDEFLSRPLI--- 110

Query: 568  RNQVNINGLCQKXXXXXXXXXXXXXXXXEDEAIVGDEVQILLAEMKKENRKNLELQRRSR 747
            +NQVN N  C+K                E++  V DEV  LL E+KKE +K    +RR +
Sbjct: 111  KNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQ 170

Query: 748  FKTAYGMGWRKYQALKRRQVKIETEAWEQAAKEYTELLHDMCEHKLAPNLPYMKSLFLGW 927
                 GMG RKYQ LKRRQVK+ETEAWEQAAKEY ELL DMCE KLAPNLPY+KSLFLGW
Sbjct: 171  RMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGW 230

Query: 928  FEPLCGKIAEEQELCMQGKLKAAYAKYLIQLPADMISVITMHKLMGLLMTGGEHGTARVV 1107
            FEPL  KIAEEQELC QGK KAAYAKY  QLPADM++VITMHKLMGLLMTGG+HGTARVV
Sbjct: 231  FEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVV 290

Query: 1108 QAACLIGDAVEQEVRIHKFLEKTKKQRVKEDEILEGDVTSDVTQEQEKLRKTVTNLMKKQ 1287
            QAA +IGDA+EQEVRIH FLEKTKKQ+ ++D+  E      VTQEQEKLRK VTNLMKKQ
Sbjct: 291  QAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDG--EHVTQEQEKLRKKVTNLMKKQ 348

Query: 1288 KLRAVQQIVKAQDESGPWGTDAKAKVGSHLLDLLLQTAYIQSPADELADCPPDIRPAFIH 1467
            KLRAV QIV+ QD+S PWG DA+AKVGS L+DLLLQTAYIQ PA++LA  PPDIRPAF+H
Sbjct: 349  KLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVH 408

Query: 1468 TSRTV-KNQANGSRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLY 1644
            + RTV K   + SRRYGIIQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLY
Sbjct: 409  SVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLY 468

Query: 1645 LPSYVMRTHGAKQQREA 1695
            LPSYVMRTHGA+QQREA
Sbjct: 469  LPSYVMRTHGARQQREA 485



 Score =  232 bits (591), Expect = 8e-58
 Identities = 109/125 (87%), Positives = 118/125 (94%)
 Frame = +1

Query: 3034 IKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSY 3213
            IKTSLQ+LTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVACR+AGLNFAGVHDSY
Sbjct: 896  IKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSY 955

Query: 3214 WTHACDVDQMNTILREKFVELYEAPILENLLEGFQKTLPSLSFPALPERGDFDLKDVLES 3393
            WTHACDVD++N ILREKFVELYEAPILE LLE FQ + P+L FP LPERGDFD++DVLES
Sbjct: 956  WTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLES 1015

Query: 3394 PYFFN 3408
            PYFFN
Sbjct: 1016 PYFFN 1020


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  677 bits (1748), Expect(3) = 0.0
 Identities = 329/393 (83%), Positives = 355/393 (90%)
 Frame = +3

Query: 1770 ALDTLGSIKWRINKRVLSVIDRIWASGGRLGDLIDRNDITLPEQPDTEDETVLXXXXXXX 1949
            AL+TLG+ KWRINKRVL VIDRIWASGGRL DL+DR D+ LPE+PDTEDE  +       
Sbjct: 290  ALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKV 349

Query: 1950 XXXXXENSERHSQRCDIELKLAVARKMKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDIC 2129
                 ENSERHSQRCDIELKLAVARKMKDE GFFYPHNLDFRGRAYPMHP+LNHLGSD+C
Sbjct: 350  RSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLC 409

Query: 2130 RGLLEFAEGRPLGKSGLKWLKIHLANLFANGVDKLSHEARIAFVENHMEDIFDSADRPLE 2309
            RG+LEFAEGRPLGKSGL+WLKIHLAN++A GVDKLS+E R+AF ENH+EDIFDSADRPLE
Sbjct: 410  RGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLE 469

Query: 2310 GKRWWLNAEDPFQFLAVSINLSEALRSESPETTISHIPVHQDGSCNGLQHYAALGRDKLG 2489
            G+RWWL+AEDPFQ LA  INLSEALRS SPETTISH+PVHQDGSCNGLQHYAALGRDKLG
Sbjct: 470  GRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 529

Query: 2490 ATSVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPAVYPDALQARALISQVDRKLVKQTV 2669
            A +VNLVAGEKPADVYSGIAARVLDIM+RDAQKDPA  P+AL+AR LISQVDRKLVKQTV
Sbjct: 530  AAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTV 589

Query: 2670 MTSVYGVTYIGARDQIKRRLKERGAFADDKELFRAACYAAKITLTALGEMFEAARSIMGW 2849
            MTSVYGVTYIGARDQIKRRLKER A AD+ E+F A+CYAAK TLTALGEMFEAARSIM W
Sbjct: 590  MTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSW 649

Query: 2850 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKIG 2948
            LGDCAKVIASENHPVRW TPLGLPVVQPYRK+G
Sbjct: 650  LGDCAKVIASENHPVRWNTPLGLPVVQPYRKLG 682



 Score =  390 bits (1001), Expect(3) = 0.0
 Identities = 193/277 (69%), Positives = 228/277 (82%), Gaps = 1/277 (0%)
 Frame = +1

Query: 868  MCEHKLAPNLPYMKSLFLGWFEPLCGKIAEEQELCMQGKLKAAYAKYLIQLPADMISVIT 1047
            MCE KLAPNLPY+KSLFLGWFEPL   IA EQ+LC QGK +AAYA Y   LPADM++VIT
Sbjct: 1    MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60

Query: 1048 MHKLMGLLMTGGEHGTARVVQAACLIGDAVEQEVRIHKFLEKTKKQRVKEDEILEGDVTS 1227
            MHKLMGLLMTG  +G+ARVVQAAC IG+A+E EVRI +F+EKTKK+    +    G  ++
Sbjct: 61   MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGG--SN 118

Query: 1228 DVTQEQEKLRKTVTNLMKKQKLRAVQQIVKAQDESGPWGTDAKAKVGSHLLDLLLQTAYI 1407
             VT+EQEKLRK V+ LMKKQKL+ V+QIVK QD+S PWG DA  KVGS L++LL++TAYI
Sbjct: 119  PVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYI 178

Query: 1408 QSPADELADCPPDIRPAFIHTSRTV-KNQANGSRRYGIIQCDPLVLKGLERTARHMVIPY 1584
            Q PAD+L D PPDIRPAF+HT +TV K    G+RRYG+I+CDPLV KGLE+TARHMVIPY
Sbjct: 179  QPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPY 238

Query: 1585 MPMLVPPVKWTGYDKGGHLYLPSYVMRTHGAKQQREA 1695
            MPMLVPP+ WTGYDKG +L+LPSYVMR HGA+QQREA
Sbjct: 239  MPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREA 275



 Score =  234 bits (597), Expect(3) = 0.0
 Identities = 111/125 (88%), Positives = 120/125 (96%)
 Frame = +1

Query: 3034 IKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSY 3213
            IKTSLQVL+LQRET+KVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+KAGLNFAGVHDSY
Sbjct: 686  IKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSY 745

Query: 3214 WTHACDVDQMNTILREKFVELYEAPILENLLEGFQKTLPSLSFPALPERGDFDLKDVLES 3393
            WTHACDVD+MN ILREKFVELY  PILENLLEGFQK+ P+L+FP LPERGDFDL++VLES
Sbjct: 746  WTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLES 805

Query: 3394 PYFFN 3408
            PYFFN
Sbjct: 806  PYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  677 bits (1748), Expect(2) = 0.0
 Identities = 329/393 (83%), Positives = 355/393 (90%)
 Frame = +3

Query: 1770 ALDTLGSIKWRINKRVLSVIDRIWASGGRLGDLIDRNDITLPEQPDTEDETVLXXXXXXX 1949
            AL+TLG+ KWRINKRVL VIDRIWASGGRL DL+DR D+ LPE+PDTEDE  +       
Sbjct: 458  ALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKV 517

Query: 1950 XXXXXENSERHSQRCDIELKLAVARKMKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDIC 2129
                 ENSERHSQRCDIELKLAVARKMKDE GFFYPHNLDFRGRAYPMHP+LNHLGSD+C
Sbjct: 518  RSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLC 577

Query: 2130 RGLLEFAEGRPLGKSGLKWLKIHLANLFANGVDKLSHEARIAFVENHMEDIFDSADRPLE 2309
            RG+LEFAEGRPLGKSGL+WLKIHLAN++A GVDKLS+E R+AF ENH+EDIFDSADRPLE
Sbjct: 578  RGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLE 637

Query: 2310 GKRWWLNAEDPFQFLAVSINLSEALRSESPETTISHIPVHQDGSCNGLQHYAALGRDKLG 2489
            G+RWWL+AEDPFQ LA  INLSEALRS SPETTISH+PVHQDGSCNGLQHYAALGRDKLG
Sbjct: 638  GRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 697

Query: 2490 ATSVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPAVYPDALQARALISQVDRKLVKQTV 2669
            A +VNLVAGEKPADVYSGIAARVLDIM+RDAQKDPA  P+AL+AR LISQVDRKLVKQTV
Sbjct: 698  AAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTV 757

Query: 2670 MTSVYGVTYIGARDQIKRRLKERGAFADDKELFRAACYAAKITLTALGEMFEAARSIMGW 2849
            MTSVYGVTYIGARDQIKRRLKER A AD+ E+F A+CYAAK TLTALGEMFEAARSIM W
Sbjct: 758  MTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSW 817

Query: 2850 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKIG 2948
            LGDCAKVIASENHPVRW TPLGLPVVQPYRK+G
Sbjct: 818  LGDCAKVIASENHPVRWNTPLGLPVVQPYRKLG 850



 Score =  463 bits (1191), Expect(2) = 0.0
 Identities = 257/461 (55%), Positives = 314/461 (68%), Gaps = 6/461 (1%)
 Frame = +1

Query: 331  MWRNLAKHVSSKTTLAPRFSRAYSFLGFCPDSVSSE---KSKFRSFYLSSCSGIGFFEP- 498
            MWRNLAKH  ++     R   +     F P + +S      K R+  L S   +    P 
Sbjct: 1    MWRNLAKHAYTR-----RLQLSSQHSSFSPSNCTSRFYFPDKARA--LESQDHVNSLRPV 53

Query: 499  -GFRIVGQFSTRDDILGRPSLHFARNQVNINGLCQKXXXXXXXXXXXXXXXXEDEAIVGD 675
             G R +G  S + D LGRP     +  VN  GL                   E++    D
Sbjct: 54   AGLRRIGVLSFQQDELGRPGFGVTKTPVNFFGL---FGYQKGYASAAEAIASEEDMSGVD 110

Query: 676  EVQILLAEMKKENRKNLELQRRSRFKTAYGMGWRKYQALKRRQVKIETEAWEQAAKEYTE 855
            EVQ L+ E+ K ++  LE Q     K   G+   K+  L+RRQ+K+ETEAWE+AAKEY E
Sbjct: 111  EVQELVEEVNKGDK--LEKQP----KLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRE 164

Query: 856  LLHDMCEHKLAPNLPYMKSLFLGWFEPLCGKIAEEQELCMQGKLKAAYAKYLIQLPADMI 1035
            LL DMCE KLAPNLPY+KSLFLGWFEPL   IA EQ+LC QGK +AAYA Y   LPADM+
Sbjct: 165  LLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMM 224

Query: 1036 SVITMHKLMGLLMTGGEHGTARVVQAACLIGDAVEQEVRIHKFLEKTKKQRVKEDEILEG 1215
            +VITMHKLMGLLMTG  +G+ARVVQAAC IG+A+E EVRI +F+EKTKK+    +    G
Sbjct: 225  AVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGG 284

Query: 1216 DVTSDVTQEQEKLRKTVTNLMKKQKLRAVQQIVKAQDESGPWGTDAKAKVGSHLLDLLLQ 1395
              ++ VT+EQEKLRK V+ LMKKQKL+ V+QIVK QD+S PWG DA  KVGS L++LL++
Sbjct: 285  --SNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIE 342

Query: 1396 TAYIQSPADELADCPPDIRPAFIHTSRTV-KNQANGSRRYGIIQCDPLVLKGLERTARHM 1572
            TAYIQ PAD+L D PPDIRPAF+HT +TV K    G+RRYG+I+CDPLV KGLE+TARHM
Sbjct: 343  TAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHM 402

Query: 1573 VIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGAKQQREA 1695
            VIPYMPMLVPP+ WTGYDKG +L+LPSYVMR HGA+QQREA
Sbjct: 403  VIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREA 443



 Score =  234 bits (597), Expect = 2e-58
 Identities = 111/125 (88%), Positives = 120/125 (96%)
 Frame = +1

Query: 3034 IKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSY 3213
            IKTSLQVL+LQRET+KVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+KAGLNFAGVHDSY
Sbjct: 854  IKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSY 913

Query: 3214 WTHACDVDQMNTILREKFVELYEAPILENLLEGFQKTLPSLSFPALPERGDFDLKDVLES 3393
            WTHACDVD+MN ILREKFVELY  PILENLLEGFQK+ P+L+FP LPERGDFDL++VLES
Sbjct: 914  WTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLES 973

Query: 3394 PYFFN 3408
            PYFFN
Sbjct: 974  PYFFN 978