BLASTX nr result

ID: Cephaelis21_contig00019131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019131
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625697.1| RING finger and WD repeat domain-containing ...   157   1e-36
emb|CBI30150.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   152   4e-35
ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   145   3e-33
ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>ref|XP_003625697.1| RING finger and WD repeat domain-containing protein [Medicago
           truncatula] gi|355500712|gb|AES81915.1| RING finger and
           WD repeat domain-containing protein [Medicago
           truncatula]
          Length = 596

 Score =  157 bits (396), Expect = 1e-36
 Identities = 65/125 (52%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
 Frame = +2

Query: 188 GDQQPSLKKAKVFDPSPMDIDKPETDCG--GEWNREEIDGLFCPICMEGWTTGGDHQVCC 361
           GD++   ++ +  + S + I     DC    E NR +IDGL CPICM+ WT  GDH +CC
Sbjct: 88  GDERNKRRRIEGGEASSLSIPIESVDCSQENECNRTDIDGLICPICMDAWTNEGDHHICC 147

Query: 362 IPCGHIYGMSCIKRWLHQLGSRGKCPQCNSKCKLKDIQMLYTSRIVSIDKELQKQVRSLE 541
           +PCGHIYGMSC+++WL Q  + GKCPQCN +C +KD++ LY SR+V++D+E QK +RSLE
Sbjct: 148 LPCGHIYGMSCVRKWLQQKKNSGKCPQCNRRCSMKDVRKLYASRVVTVDEESQKMIRSLE 207

Query: 542 CKCAS 556
            KCAS
Sbjct: 208 NKCAS 212


>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/161 (47%), Positives = 105/161 (65%), Gaps = 13/161 (8%)
 Frame = +2

Query: 113 NGAATSSQD----------RASVINPRGFRRSQEAGDQQPSLKKAKVFDP-SPMDIDKPE 259
           NGA TS Q            A  ++  GF   QE G +   ++  ++    S    +  E
Sbjct: 35  NGAVTSDQAISVNGGSGEVLALRVSDEGF---QEGGGEMRRVEGGEISAMGSSSSSNGGE 91

Query: 260 TDCGGE-WNREEIDGLFCPICMEGWTTGGDHQVCCIPCGHIYGMSCIKRWLHQLG-SRGK 433
           T  G + W +++IDGL CPICME WT+GG+HQVCC+PCGHIYG+SCIK+W  Q G S GK
Sbjct: 92  TQEGSDGWVQDQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGK 151

Query: 434 CPQCNSKCKLKDIQMLYTSRIVSIDKELQKQVRSLECKCAS 556
           CPQC  KC L++++ LY SR+V++D++L+K++RSLE KCAS
Sbjct: 152 CPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCAS 192


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/161 (47%), Positives = 105/161 (65%), Gaps = 13/161 (8%)
 Frame = +2

Query: 113 NGAATSSQD----------RASVINPRGFRRSQEAGDQQPSLKKAKVFDP-SPMDIDKPE 259
           NGA TS Q            A  ++  GF   QE G +   ++  ++    S    +  E
Sbjct: 35  NGAVTSDQAISVNGGSGEVLALRVSDEGF---QEGGGEMRRVEGGEISAMGSSSSSNGGE 91

Query: 260 TDCGGE-WNREEIDGLFCPICMEGWTTGGDHQVCCIPCGHIYGMSCIKRWLHQLG-SRGK 433
           T  G + W +++IDGL CPICME WT+GG+HQVCC+PCGHIYG+SCIK+W  Q G S GK
Sbjct: 92  TQEGSDGWVQDQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGK 151

Query: 434 CPQCNSKCKLKDIQMLYTSRIVSIDKELQKQVRSLECKCAS 556
           CPQC  KC L++++ LY SR+V++D++L+K++RSLE KCAS
Sbjct: 152 CPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCAS 192


>ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Glycine max]
          Length = 631

 Score =  145 bits (367), Expect = 3e-33
 Identities = 62/145 (42%), Positives = 90/145 (62%)
 Frame = +2

Query: 122 ATSSQDRASVINPRGFRRSQEAGDQQPSLKKAKVFDPSPMDIDKPETDCGGEWNREEIDG 301
           +TS+ +  ++I  +  RR  E G+   S     +   +             EW   ++DG
Sbjct: 77  STSNSEVVTLIESQNKRRRTEGGEASCSFANGSLSQEN-------------EWASPDVDG 123

Query: 302 LFCPICMEGWTTGGDHQVCCIPCGHIYGMSCIKRWLHQLGSRGKCPQCNSKCKLKDIQML 481
           L CPICM+ WT  G+H +CC+PCGHIYGMSCIK+WL    +  KCPQC  KC LKD++ L
Sbjct: 124 LLCPICMDAWTNNGEHHICCLPCGHIYGMSCIKKWLQHRRNSNKCPQCKVKCSLKDVRKL 183

Query: 482 YTSRIVSIDKELQKQVRSLECKCAS 556
           Y S++V++++E QK++RSLE KCA+
Sbjct: 184 YASQVVAVEEENQKRIRSLEAKCAA 208


>ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|222833571|gb|EEE72048.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  144 bits (362), Expect = 1e-32
 Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 6/104 (5%)
 Frame = +2

Query: 263 DCGGE------WNREEIDGLFCPICMEGWTTGGDHQVCCIPCGHIYGMSCIKRWLHQLGS 424
           D GGE      WNR E DGLFCPICME WT  GDH +CC+PCGH++G+SCI++WL Q G 
Sbjct: 153 DAGGESSQNSQWNRSEFDGLFCPICMEAWTNEGDHHICCLPCGHLFGLSCIEKWLRQRGR 212

Query: 425 RGKCPQCNSKCKLKDIQMLYTSRIVSIDKELQKQVRSLECKCAS 556
             KCPQCN K  L+DI+ L+  RI  +D+E QK++R LE KCAS
Sbjct: 213 LAKCPQCNRKGTLRDIRKLFVPRIAVVDEESQKRIRFLEEKCAS 256


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