BLASTX nr result

ID: Cephaelis21_contig00019083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019083
         (2090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-42
gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|1171659...   171   9e-40
ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...   170   1e-39
ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-38
ref|XP_002274832.1| PREDICTED: pre-rRNA-processing protein TSR2 ...   163   2e-37

>ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  180 bits (456), Expect = 2e-42
 Identities = 94/187 (50%), Positives = 123/187 (65%)
 Frame = -1

Query: 878 FQEGINLLLSRWTALQMAVLNEWGGPHSHLKSQQLAIDLFSLLTQSKEKVNNYDVEDFLD 699
           F+EGI L+LS+W+ALQ+AV NEWGG  SHL ++QLA D+FS  TQSKE +   D+E  +D
Sbjct: 29  FREGIRLILSKWSALQLAVENEWGGRGSHLLAEQLASDIFSWFTQSKEPLYIDDLESIMD 88

Query: 698 DAMLSLGTEIADGSIEEIAENLMLMHEGCLEGDFSSIQKLRTTDPPKGAVTHAPKAXXXX 519
           +AMLSL T I DGS+EE+AE LM+MHE CLEG++SSIQKLR   P  GA  H  +A    
Sbjct: 89  EAMLSLNTMIEDGSVEEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQA---V 145

Query: 518 XXXXXXXXXGHEDSVNGGLSRMVVDVPESHSSVNRAKMMIDERKPQSAEAEDGWTVVASK 339
                      +D +    S M+VD PE     N     ++E   + A++EDGWTVV+S+
Sbjct: 146 EDDDDSEDSDSDDKMGDDGSNMMVDTPEFQLKTNLVNKPVNEPGAKEAQSEDGWTVVSSR 205

Query: 338 RNKGRRN 318
           RNKG+RN
Sbjct: 206 RNKGKRN 212


>gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|117165980|dbj|BAF36282.1|
           hypothetical protein [Ipomoea trifida]
          Length = 201

 Score =  171 bits (432), Expect = 9e-40
 Identities = 96/188 (51%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
 Frame = -1

Query: 875 QEGINLLLSRWTALQMAVLNEWGGPHSHLKSQQLAIDLFSLLTQSKEKVNNYDVEDFLDD 696
           QEGINL+LSRW +LQMAV NEWGG  SH KSQ+L+  +FS  TQSKE+V   D+E+ LD+
Sbjct: 20  QEGINLVLSRWASLQMAVANEWGGRGSHQKSQELSERIFSFFTQSKEQVYIDDLEEILDE 79

Query: 695 AMLS-LGTEIADGSIEEIAENLMLMHEGCLEGDFSSIQKLRTTDPPKGAVTHAPKAXXXX 519
            MLS   TE+ DGSIEE+AE +M+MHE C EG+F SI +L+ T+P   AVT++ +A    
Sbjct: 80  FMLSDFNTEVGDGSIEEVAEKMMIMHEQCTEGNFESINELKRTNPGNSAVTYSRQA---A 136

Query: 518 XXXXXXXXXGHEDSVNGGLSRMVVDVPESHSSVNRAKMMIDE-RKPQSAEAEDGWTVVAS 342
                       D V    S M VD  E H    +  MM+DE R    AE EDGWTVV+S
Sbjct: 137 SDDEDEDDDVENDKVGDDSSDMAVDASEVH---GQKDMMVDEPRTNDGAETEDGWTVVSS 193

Query: 341 KRNKGRRN 318
           +R  GRRN
Sbjct: 194 RRKNGRRN 201


>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score =  170 bits (431), Expect = 1e-39
 Identities = 85/188 (45%), Positives = 119/188 (63%)
 Frame = -1

Query: 881 LFQEGINLLLSRWTALQMAVLNEWGGPHSHLKSQQLAIDLFSLLTQSKEKVNNYDVEDFL 702
           LFQEGI L+LSRW+ALQ+AV NEWGG  S   + Q+  D+FS  TQSKE +   D+E+ L
Sbjct: 26  LFQEGIFLILSRWSALQLAVENEWGGRGSRQLADQIGFDIFSWFTQSKEPLYIDDLENIL 85

Query: 701 DDAMLSLGTEIADGSIEEIAENLMLMHEGCLEGDFSSIQKLRTTDPPKGAVTHAPKAXXX 522
           D+ M+SL T I DGS+EE+AE LM+MHE CLEG++ +I++LR   P  G   H  +A   
Sbjct: 86  DEGMISLNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLRQARPTAGVHQHIRQAANG 145

Query: 521 XXXXXXXXXXGHEDSVNGGLSRMVVDVPESHSSVNRAKMMIDERKPQSAEAEDGWTVVAS 342
                       ++S+    S M++D P+  S  N   M ++E   Q A+ ED WTV++S
Sbjct: 146 DDDEDDDSSDDDDNSMGDNRSNMMMDAPKFQSKPNEVDMQVNEPSCQEAQVEDEWTVISS 205

Query: 341 KRNKGRRN 318
           K+N+G+RN
Sbjct: 206 KKNRGKRN 213


>ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  166 bits (421), Expect = 2e-38
 Identities = 92/187 (49%), Positives = 122/187 (65%)
 Frame = -1

Query: 878 FQEGINLLLSRWTALQMAVLNEWGGPHSHLKSQQLAIDLFSLLTQSKEKVNNYDVEDFLD 699
           F+EGI L+LS+W+ALQ+AV NEWGG  S L ++QLA D+ S  TQSKE +   D+E  LD
Sbjct: 30  FREGICLILSKWSALQLAVENEWGGRGSGLLAEQLASDILSWFTQSKEPLFIDDLEGILD 89

Query: 698 DAMLSLGTEIADGSIEEIAENLMLMHEGCLEGDFSSIQKLRTTDPPKGAVTHAPKAXXXX 519
           +AMLSL T I DGSIEE+AE LM+MHE CLEG++SSIQKLR   P   A  H  +A    
Sbjct: 90  EAMLSLNTMIDDGSIEEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQHVKQA---V 146

Query: 518 XXXXXXXXXGHEDSVNGGLSRMVVDVPESHSSVNRAKMMIDERKPQSAEAEDGWTVVASK 339
                    G++D +    S M+VD PE  S +      ++  + + A++EDGWTVV+S+
Sbjct: 147 DSDDDSEDSGNDDKMGDDESNMMVDAPEFQSKMYPVNKPVNVPRAKEAQSEDGWTVVSSR 206

Query: 338 RNKGRRN 318
           RNK +RN
Sbjct: 207 RNKDKRN 213


>ref|XP_002274832.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Vitis
           vinifera] gi|298204922|emb|CBI34229.3| unnamed protein
           product [Vitis vinifera]
          Length = 208

 Score =  163 bits (412), Expect = 2e-37
 Identities = 92/191 (48%), Positives = 127/191 (66%), Gaps = 5/191 (2%)
 Frame = -1

Query: 875 QEGINLLLSRWTALQMAVLNEWGGPHSHLKSQQLAIDLFSLLTQSKEKVNNYDVEDFLDD 696
           Q+GI +LLS+W+ALQMAV NEWGG  S   + QLA+D+FS  T S+E +   D+E+ LD+
Sbjct: 19  QQGIVMLLSQWSALQMAVHNEWGGRQSSQLADQLALDIFSWFTHSREPLYIDDLENILDE 78

Query: 695 AMLSLGTEIADGSIEEIAENLMLMHEGCLEGDFSSIQKLRTTDPPKGAVTHAPKAXXXXX 516
           AMLSL T   DGSIEE+AE LM MHE CLEG++ SI+KLR     + AV H  +A     
Sbjct: 79  AMLSLNTMTEDGSIEEVAEKLMTMHEECLEGNYQSIEKLREAG-SRPAVHHIRQAVNEDN 137

Query: 515 XXXXXXXXGHEDSV-NGGLSRMVVDVPES-HSSVNRAKMMIDERK---PQSAEAEDGWTV 351
                    +++++ N   S M+VD PE+   ++N A+M ++E +   P+ AEA+DGW V
Sbjct: 138 DDDDDDDDDNDENMGNDNSSNMIVDAPEAPPPNLNPAEMPVEEPRASNPKVAEADDGWVV 197

Query: 350 VASKRNKGRRN 318
           VASKRN+G+RN
Sbjct: 198 VASKRNRGKRN 208


Top