BLASTX nr result

ID: Cephaelis21_contig00019044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019044
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD39399.2| OSJNBb0089K24.9 [Oryza sativa Japonica Group]          57   3e-06
gb|ABF95980.1| retrotransposon protein, putative, Ty3-gypsy subc...    57   5e-06
emb|CAE05067.2| OSJNBa0094P09.6 [Oryza sativa Japonica Group]          57   5e-06
emb|CAH67938.1| H0211F06-OSIGBa0153M17.10 [Oryza sativa Indica G...    56   9e-06

>emb|CAD39399.2| OSJNBb0089K24.9 [Oryza sativa Japonica Group]
          Length = 1320

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 24/55 (43%), Positives = 37/55 (67%)
 Frame = +1

Query: 1    LRACVAEFGERYN*NVTLTEIVIINNYSPTIEMVPYETLYKKKCLTPIYKNKIGE 165
            LRACV +FG  ++ N+   E   IN+Y  +++M PYE LY +KC TP+  +++GE
Sbjct: 1072 LRACVLDFGGSWDKNLPYAEFSYINSYQASLQMAPYEALYGRKCRTPLLWDQVGE 1126


>gb|ABF95980.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 284

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 24/55 (43%), Positives = 37/55 (67%)
 Frame = +1

Query: 1   LRACVAEFGERYN*NVTLTEIVIINNYSPTIEMVPYETLYKKKCLTPIYKNKIGE 165
           LRACV +FG+ ++ ++   E    NNY  +I+M PYE LY +KC TP+  +++GE
Sbjct: 36  LRACVLDFGKTWDKSLPYAEFSYNNNYQASIQMAPYEALYGRKCRTPLLWDQVGE 90


>emb|CAE05067.2| OSJNBa0094P09.6 [Oryza sativa Japonica Group]
          Length = 1803

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 24/55 (43%), Positives = 37/55 (67%)
 Frame = +1

Query: 1    LRACVAEFGERYN*NVTLTEIVIINNYSPTIEMVPYETLYKKKCLTPIYKNKIGE 165
            LRACV +FG+ ++ N+   E    N+Y  +I+M PYE LY +KC TP+  +++GE
Sbjct: 1555 LRACVLDFGKTWDKNLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQVGE 1609


>emb|CAH67938.1| H0211F06-OSIGBa0153M17.10 [Oryza sativa Indica Group]
          Length = 1621

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 24/55 (43%), Positives = 36/55 (65%)
 Frame = +1

Query: 1    LRACVAEFGERYN*NVTLTEIVIINNYSPTIEMVPYETLYKKKCLTPIYKNKIGE 165
            LRACV +FGE ++ N+   E    N+Y  +++M PYE LY +KC TP+  ++ GE
Sbjct: 1389 LRACVLDFGESWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGE 1443


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