BLASTX nr result

ID: Cephaelis21_contig00018452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018452
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04966.2| OSJNBa0070D17.17 [Oryza sativa Japonica Group] g...   100   9e-20
emb|CAH66114.1| OSIGBa0145B03.2 [Oryza sativa Indica Group]           100   1e-19
gb|ABA96173.1| retrotransposon protein, putative, unclassified [...   100   2e-19
gb|AAM74336.1|AC115686_3 Putative retroelement [Oryza sativa Jap...   100   2e-19
gb|AAQ56541.1| putative gag-protein [Oryza sativa Japonica Group]      99   3e-19

>emb|CAE04966.2| OSJNBa0070D17.17 [Oryza sativa Japonica Group]
           gi|38347547|emb|CAE02358.2| OSJNBb0016B03.3 [Oryza
           sativa Japonica Group]
          Length = 371

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/148 (37%), Positives = 87/148 (58%)
 Frame = +3

Query: 6   FGVFQLEGPAAEWWRTIADKWTTEGRDRQWSVFRDEFRKQFIPKVVKDRKEEEFISLKQR 185
           F   QL+GPA+EWW         EG+   W+ F + F+K  IP  V   K+ EF +LKQR
Sbjct: 100 FASHQLQGPASEWWDHFRMN-RAEGQPITWAEFTEAFKKTHIPVGVVSLKKREFRALKQR 158

Query: 186 SLTVAQYEVQFTKLSKYAPEMVNTEEKRKRRFLQGLNVELQRTLVSANMSTYANMVDFAR 365
             TVA+Y  +F +L++YAPE V T+E+R+ +FL+GL  EL  TL+S + + +  +VD A 
Sbjct: 159 DHTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYADFQQLVDKAI 218

Query: 366 KAEECEGKCKDFQTARRTAWKARSGMPQ 449
           + E+ + +  D +  + T ++   G  Q
Sbjct: 219 RLEDKKNR-MDNRKRKMTVFQEAQGSSQ 245


>emb|CAH66114.1| OSIGBa0145B03.2 [Oryza sativa Indica Group]
          Length = 371

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/148 (37%), Positives = 87/148 (58%)
 Frame = +3

Query: 6   FGVFQLEGPAAEWWRTIADKWTTEGRDRQWSVFRDEFRKQFIPKVVKDRKEEEFISLKQR 185
           F   QL+GPA+EWW         EG+   W+ F + F+K  IP  V   K+ EF +LKQ+
Sbjct: 100 FASHQLQGPASEWWDHFRMN-RAEGQSITWADFTEAFKKTHIPTGVVSLKKREFRALKQK 158

Query: 186 SLTVAQYEVQFTKLSKYAPEMVNTEEKRKRRFLQGLNVELQRTLVSANMSTYANMVDFAR 365
             TVA+Y  +F +L++YAPE V T+E+R+ +FL+GL  EL  TL+S + + +  +VD A 
Sbjct: 159 DQTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYADFQQLVDKAI 218

Query: 366 KAEECEGKCKDFQTARRTAWKARSGMPQ 449
           + E+ + +  D +  + T ++   G  Q
Sbjct: 219 RLEDKKNR-MDNRKRKMTVFQEAQGSSQ 245


>gb|ABA96173.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 395

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/148 (37%), Positives = 87/148 (58%)
 Frame = +3

Query: 6   FGVFQLEGPAAEWWRTIADKWTTEGRDRQWSVFRDEFRKQFIPKVVKDRKEEEFISLKQR 185
           F   QL+GPA+EWW         EG+   W+ F + F+K  IP  V   K+ EF +LKQ+
Sbjct: 174 FASHQLQGPASEWWDHFRMN-RAEGQPITWADFTEAFKKTHIPTGVVSLKKREFRALKQK 232

Query: 186 SLTVAQYEVQFTKLSKYAPEMVNTEEKRKRRFLQGLNVELQRTLVSANMSTYANMVDFAR 365
             TVA+Y  +F +L++YAPE V T+E+R+ +FL+GL  EL  TL+S + + +  +VD A 
Sbjct: 233 DQTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYADFQQLVDKAI 292

Query: 366 KAEECEGKCKDFQTARRTAWKARSGMPQ 449
           + E+ + +  D +  + T ++   G  Q
Sbjct: 293 RLEDKKNR-MDNRKRKMTVFQEAQGSSQ 319


>gb|AAM74336.1|AC115686_3 Putative retroelement [Oryza sativa Japonica Group]
           gi|23477814|gb|AAN34954.1| Putative retroelement [Oryza
           sativa Japonica Group] gi|31431273|gb|AAP53081.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 371

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/148 (37%), Positives = 87/148 (58%)
 Frame = +3

Query: 6   FGVFQLEGPAAEWWRTIADKWTTEGRDRQWSVFRDEFRKQFIPKVVKDRKEEEFISLKQR 185
           F   QL+GPA+EWW         EG+   W+ F + F+K  IP  V   K+ EF +LKQ+
Sbjct: 100 FASHQLQGPASEWWDHFRMN-RAEGQPITWADFTEAFKKTHIPTGVVSLKKREFRALKQK 158

Query: 186 SLTVAQYEVQFTKLSKYAPEMVNTEEKRKRRFLQGLNVELQRTLVSANMSTYANMVDFAR 365
             TVA+Y  +F +L++YAPE V T+E+R+ +FL+GL  EL  TL+S + + +  +VD A 
Sbjct: 159 DQTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYADFQQLVDKAI 218

Query: 366 KAEECEGKCKDFQTARRTAWKARSGMPQ 449
           + E+ + +  D +  + T ++   G  Q
Sbjct: 219 RLEDKKNR-MDNRKRKMTVFQEAQGSSQ 245


>gb|AAQ56541.1| putative gag-protein [Oryza sativa Japonica Group]
          Length = 377

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/148 (37%), Positives = 86/148 (58%)
 Frame = +3

Query: 6   FGVFQLEGPAAEWWRTIADKWTTEGRDRQWSVFRDEFRKQFIPKVVKDRKEEEFISLKQR 185
           F   QL+GPA+EWW         EG+   W  F + F+K  IP  V   K+ EF +LKQ+
Sbjct: 100 FASHQLQGPASEWWDHFRMN-RAEGQPITWEEFTEGFKKTHIPVGVVALKKREFRALKQK 158

Query: 186 SLTVAQYEVQFTKLSKYAPEMVNTEEKRKRRFLQGLNVELQRTLVSANMSTYANMVDFAR 365
             TVA+Y  +F +L++YAPE V T+E+R+ +FL+GL  EL  TL+S + + +  +VD A 
Sbjct: 159 DHTVAEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVTLISHDYADFQQLVDKAI 218

Query: 366 KAEECEGKCKDFQTARRTAWKARSGMPQ 449
           + E+ + +  D +  R T ++   G  Q
Sbjct: 219 RLEDKKNR-MDNRKRRMTVFQEAQGSSQ 245