BLASTX nr result

ID: Cephaelis21_contig00018442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018442
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519316.1| Squamosa promoter-binding protein, putative ...    47   7e-06

>ref|XP_002519316.1| Squamosa promoter-binding protein, putative [Ricinus communis]
           gi|223541631|gb|EEF43180.1| Squamosa promoter-binding
           protein, putative [Ricinus communis]
          Length = 1026

 Score = 47.0 bits (110), Expect(2) = 7e-06
 Identities = 28/71 (39%), Positives = 39/71 (54%)
 Frame = -2

Query: 547 AIIGHC*SFLGTLKILIHPAAGHIVLDTPLPHQNDKSYRIANIKQIVVCASCEVEFSDKG 368
           A + HC SF+           G +VLDTPLP ++ K  RI++IK I V  S   +F+ KG
Sbjct: 555 ARVQHCVSFIYN---------GQVVLDTPLPLKSHKHCRISSIKPIAVTLSERTDFTVKG 605

Query: 367 VNLSLPTARSL 335
            N+  P+ R L
Sbjct: 606 FNIFRPSTRLL 616



 Score = 29.6 bits (65), Expect(2) = 7e-06
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 234 RLLCVIKGKYLAHERCVDVI-RVDLHVE*AETEKLSFTYSIPEV 106
           RLLC ++GKYL  E   D++   D   E  + + L+F  SIP +
Sbjct: 614 RLLCALEGKYLVQETSRDLMDGADTTNEHNKLQCLTFPCSIPNI 657


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