BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018420
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   602   e-170
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   600   e-169
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   593   e-167
ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   591   e-166
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V...   580   e-163

>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
            gi|302141781|emb|CBI18984.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  602 bits (1551), Expect = e-170
 Identities = 306/342 (89%), Positives = 326/342 (95%), Gaps = 1/342 (0%)
 Frame = -2

Query: 1290 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 1111
            MAP+LQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1110 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG-RQGGYPCPPYKIII 934
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG RQGGYPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120

Query: 933  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 754
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+EEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 753  NRILHICQEEGLNLDSEALSTLSSISQGDLRRAITYLQYAARTFGSYISSRELISVSAVV 574
            +RILHIC+EE LNLDSEALSTLSSISQGDLRRAITYLQ AAR FGS ISS++LISVS VV
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 573  PEEVVRALYSAGRSGNFDLADKEVKNVIAEGYPVSQTLSQLFDIVVESDDITDEQKARIC 394
            P+ VV+AL++A +SG+FD A+KEV NVIAEGYPVSQ L QLFD+VVE+ DI+DEQKARIC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 299

Query: 393  KKLAEADKCLVDGADEYLQLLDVASNTMRAICNLPENFSYES 268
            K+LAEADKCLVDGADEYLQLLDVASN MRA+CN+PE F +ES
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  600 bits (1546), Expect = e-169
 Identities = 305/342 (89%), Positives = 325/342 (95%), Gaps = 1/342 (0%)
 Frame = -2

Query: 1290 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 1111
            MAP+LQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1110 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG-RQGGYPCPPYKIII 934
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGSG RQGGYPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120

Query: 933  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 754
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+EEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 753  NRILHICQEEGLNLDSEALSTLSSISQGDLRRAITYLQYAARTFGSYISSRELISVSAVV 574
            +RILHIC+EE LNLDSEALSTLSSISQGDLRRAITYLQ AAR FGS ISS++LISVS VV
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 573  PEEVVRALYSAGRSGNFDLADKEVKNVIAEGYPVSQTLSQLFDIVVESDDITDEQKARIC 394
            P+ VV+AL++A +SG+FD A+KEV NVIAEGYPVSQ L QLFD+VVE+ DI+DEQKARIC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 299

Query: 393  KKLAEADKCLVDGADEYLQLLDVASNTMRAICNLPENFSYES 268
            K+LAEADKCLVDGADEYLQLLDVASN MRA+CN+PE F +ES
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540549|gb|EEF42116.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 342

 Score =  593 bits (1530), Expect = e-167
 Identities = 294/342 (85%), Positives = 323/342 (94%), Gaps = 1/342 (0%)
 Frame = -2

Query: 1290 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 1111
            MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 1110 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG-RQGGYPCPPYKIII 934
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGSG R GGYPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIII 120

Query: 933  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 754
            LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL+EEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 753  NRILHICQEEGLNLDSEALSTLSSISQGDLRRAITYLQYAARTFGSYISSRELISVSAVV 574
            +R+LHIC+EEGLNLD+EALSTLS +SQGDLRRAITYLQ AAR +GS ISS++LISVS V+
Sbjct: 181  SRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVI 240

Query: 573  PEEVVRALYSAGRSGNFDLADKEVKNVIAEGYPVSQTLSQLFDIVVESDDITDEQKARIC 394
            P+E V ALY+A RSG+FD+A+KEV N+IAEGYPVSQ L QL ++VVE+DDI+DEQKA+IC
Sbjct: 241  PQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQIC 300

Query: 393  KKLAEADKCLVDGADEYLQLLDVASNTMRAICNLPENFSYES 268
            K L  ADKCLVDGADEYLQLLDVASNTMRA+CN+P+ F YES
Sbjct: 301  KSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPYES 342


>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  591 bits (1524), Expect = e-166
 Identities = 295/341 (86%), Positives = 318/341 (93%), Gaps = 1/341 (0%)
 Frame = -2

Query: 1290 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 1111
            MAPLLQSSQ WVEKYRPKQ+KDVAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 1110 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG-RQGGYPCPPYKIII 934
            AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG RQG YPCPPYKIII
Sbjct: 61   AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120

Query: 933  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 754
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL EEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS 180

Query: 753  NRILHICQEEGLNLDSEALSTLSSISQGDLRRAITYLQYAARTFGSYISSRELISVSAVV 574
            NRILHIC EEGL LD+EALSTLSS+SQGDLRRAITYLQ AAR FGS ISS++LISVS  +
Sbjct: 181  NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI 240

Query: 573  PEEVVRALYSAGRSGNFDLADKEVKNVIAEGYPVSQTLSQLFDIVVESDDITDEQKARIC 394
            P EV  A+Y+A ++G+FDLA+KEV +VIAEGYPVSQ L+QLF++VVE DDI+DEQKARIC
Sbjct: 241  PREVTEAIYAACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARIC 300

Query: 393  KKLAEADKCLVDGADEYLQLLDVASNTMRAICNLPENFSYE 271
            K LA ADKCLVDGADEYLQLLDV SNTMR++CN+P+ FSY+
Sbjct: 301  KSLATADKCLVDGADEYLQLLDVVSNTMRSLCNMPQEFSYD 341


>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
          Length = 334

 Score =  580 bits (1496), Expect = e-163
 Identities = 299/342 (87%), Positives = 319/342 (93%), Gaps = 1/342 (0%)
 Frame = -2

Query: 1290 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 1111
            MAP+LQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1110 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG-RQGGYPCPPYKIII 934
            AIAHQLFG       VLELNASDDRGINVVRTKIKDFAAVAVGSG RQGGYPCPPYKIII
Sbjct: 61   AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 113

Query: 933  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 754
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+EEIMS
Sbjct: 114  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 173

Query: 753  NRILHICQEEGLNLDSEALSTLSSISQGDLRRAITYLQYAARTFGSYISSRELISVSAVV 574
            +RILHIC+EE LNLDSEALSTLSSISQGDLRRAITYLQ AAR FGS ISS++LISVS VV
Sbjct: 174  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 233

Query: 573  PEEVVRALYSAGRSGNFDLADKEVKNVIAEGYPVSQTLSQLFDIVVESDDITDEQKARIC 394
            P+ VV+AL++A +SG+FD A+KEV NVIAEGYPVSQ L QLFD+VVE+ DI+DEQKARIC
Sbjct: 234  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 292

Query: 393  KKLAEADKCLVDGADEYLQLLDVASNTMRAICNLPENFSYES 268
            K+LAEADKCLVDGADEYLQLLDVASN MRA+CN+PE F +ES
Sbjct: 293  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 334