BLASTX nr result

ID: Cephaelis21_contig00018382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018382
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530567.1| Signal recognition particle 14 kDa protein, ...   133   3e-29
ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kD...   131   9e-29
gb|AFK37103.1| unknown [Lotus japonicus]                              130   3e-28
ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28
gb|ABK93883.1| unknown [Populus trichocarpa]                          129   6e-28

>ref|XP_002530567.1| Signal recognition particle 14 kDa protein, putative [Ricinus
           communis] gi|223529866|gb|EEF31797.1| Signal recognition
           particle 14 kDa protein, putative [Ricinus communis]
          Length = 120

 Score =  133 bits (334), Expect = 3e-29
 Identities = 66/90 (73%), Positives = 77/90 (85%), Gaps = 3/90 (3%)
 Frame = -1

Query: 545 LQPDPFLNELSNMFEQHTEKGSVWVTLKHSTDKSKAQRNKM---QKPLEFKCLIRATDGK 375
           LQPDPFLNEL+ MFEQ TE+G+VWVTLK S+ K KA RNKM    +P+E++CLIRAT+GK
Sbjct: 4   LQPDPFLNELTTMFEQTTEEGTVWVTLKRSSQKCKAHRNKMITDGEPIEYRCLIRATNGK 63

Query: 374 RTISTLVGQKDHQRFQASYATILKARMTAL 285
           RTIST VG KDHQRFQ+SYATILKA MT+L
Sbjct: 64  RTISTSVGAKDHQRFQSSYATILKAHMTSL 93


>ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449474535|ref|XP_004154207.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449506299|ref|XP_004162708.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus]
          Length = 118

 Score =  131 bits (330), Expect = 9e-29
 Identities = 67/90 (74%), Positives = 77/90 (85%), Gaps = 3/90 (3%)
 Frame = -1

Query: 545 LQPDPFLNELSNMFEQHTEKGSVWVTLKHSTDKSKAQRNKMQ---KPLEFKCLIRATDGK 375
           LQ DPFLNEL++MFE+ TEKGSVWVTLK S+ KSK QRNKM    +P+E++CLIRATDGK
Sbjct: 4   LQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGK 63

Query: 374 RTISTLVGQKDHQRFQASYATILKARMTAL 285
           +TIST VG KDH RFQASY+TILKA MTAL
Sbjct: 64  KTISTSVGAKDHLRFQASYSTILKAHMTAL 93


>gb|AFK37103.1| unknown [Lotus japonicus]
          Length = 123

 Score =  130 bits (326), Expect = 3e-28
 Identities = 66/90 (73%), Positives = 77/90 (85%), Gaps = 3/90 (3%)
 Frame = -1

Query: 545 LQPDPFLNELSNMFEQHTEKGSVWVTLKHSTDKSKAQRNKMQ---KPLEFKCLIRATDGK 375
           LQ DPFLNEL+++FE+ TEKGSVWVTLK S+ KSK QRNK+    + +E++CLIRATDGK
Sbjct: 4   LQLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRATDGK 63

Query: 374 RTISTLVGQKDHQRFQASYATILKARMTAL 285
           +TIST VG KDHQRFQASYATILKA MTAL
Sbjct: 64  KTISTSVGPKDHQRFQASYATILKAHMTAL 93


>ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|222872264|gb|EEF09395.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  129 bits (323), Expect = 6e-28
 Identities = 63/90 (70%), Positives = 76/90 (84%), Gaps = 3/90 (3%)
 Frame = -1

Query: 545 LQPDPFLNELSNMFEQHTEKGSVWVTLKHSTDKSKAQRNKMQ---KPLEFKCLIRATDGK 375
           LQ DPFLNEL+ +++  T+KGS+WVTLK S+ KSK QRNKM    +P+E++CLIRATDGK
Sbjct: 4   LQLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRATDGK 63

Query: 374 RTISTLVGQKDHQRFQASYATILKARMTAL 285
           +TIST VG +DHQRFQASYATILKA MTAL
Sbjct: 64  KTISTSVGARDHQRFQASYATILKAHMTAL 93


>gb|ABK93883.1| unknown [Populus trichocarpa]
          Length = 121

 Score =  129 bits (323), Expect = 6e-28
 Identities = 63/90 (70%), Positives = 76/90 (84%), Gaps = 3/90 (3%)
 Frame = -1

Query: 545 LQPDPFLNELSNMFEQHTEKGSVWVTLKHSTDKSKAQRNKMQ---KPLEFKCLIRATDGK 375
           LQ DPFLNEL+ +++  T+KGS+WVTLK S+ KSK QRNKM    +P+E++CLIRATDGK
Sbjct: 4   LQLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRATDGK 63

Query: 374 RTISTLVGQKDHQRFQASYATILKARMTAL 285
           +TIST VG +DHQRFQASYATILKA MTAL
Sbjct: 64  KTISTSVGARDHQRFQASYATILKAHMTAL 93


Top