BLASTX nr result

ID: Cephaelis21_contig00018340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018340
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631761.1| PREDICTED: transcription initiation factor T...    68   9e-10
ref|XP_002285276.2| PREDICTED: transcription initiation factor T...    60   3e-07

>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
           unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 38/61 (62%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = +1

Query: 370 MDEEEIEKAVIAYLKKKGFKHTELAFQEE-QQHLKITATXXXXXXXXXXDPEIARQILSF 546
           M+EEEIEKAVIAYLKKKGFK TELAFQEE  QH                DP+IA+ ILSF
Sbjct: 1   MEEEEIEKAVIAYLKKKGFKQTELAFQEEHHQHQNQQTKNSSSSISSSTDPDIAKHILSF 60

Query: 547 S 549
           S
Sbjct: 61  S 61


>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 1 [Vitis vinifera]
          Length = 667

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 33/55 (60%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +1

Query: 370 MDEEEIEKAVIAYLKKKGFKHTELAFQEE-QQHLKITATXXXXXXXXXXDPEIAR 531
           M+EEEIEKAVIAYLKKKGFK TELAFQEE  QH                DP+IA+
Sbjct: 1   MEEEEIEKAVIAYLKKKGFKQTELAFQEEHHQHQNQQTKNSSSSISSSTDPDIAK 55


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