BLASTX nr result

ID: Cephaelis21_contig00018301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018301
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   427   e-117
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         424   e-116
gb|AEV41133.1| D1-type cyclin [Populus x canadensis]                  412   e-112
ref|XP_002312511.1| predicted protein [Populus trichocarpa] gi|1...   410   e-112
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]         408   e-111

>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|296086502|emb|CBI32091.3|
            unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  427 bits (1097), Expect = e-117
 Identities = 221/332 (66%), Positives = 258/332 (77%)
 Frame = -3

Query: 1274 MSVSYSDCFSDLLCGEDSGTIFAGDDQPECSSEIESRMPPEDLEESLTRLIQHEGEYVPG 1095
            MS+SYSD FSDLLCGEDS +I +GD  PECSS++ES   P D+EES+   I+ E  +VPG
Sbjct: 1    MSLSYSDRFSDLLCGEDS-SILSGD-LPECSSDLES---PTDIEESIAGFIEDERNFVPG 55

Query: 1094 RDYAERFQSQSLDASARAASIAWILKVQRYYGFQPLTAYLSVNYFDRVLYSRSLPQTSGW 915
             DY  RF+S SLDASAR  S+AWILKVQ Y+GFQPLTAYLSVNY DR LYSR LPQT+GW
Sbjct: 56   FDYLARFRSHSLDASAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLPQTNGW 115

Query: 914  PMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTISKMEFLVLGTLDWRLRSIT 735
            P+QLLSVACLSLAAKMEE LVPSLLDLQVEGAK+IFE +TI +ME LVLG LDWRLRSIT
Sbjct: 116  PLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSIT 175

Query: 734  PFSFLGFFAHKVDPTGTYTGFLISRASDIILSHIQDASFLEYWPSCIAAATILCAARDLP 555
            PFSF+GFFA+K+D +G+  GFLISRA+ IILS+IQ+ASFLEYWPSCIAAA ILCAA ++P
Sbjct: 176  PFSFIGFFAYKLDSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCAANEIP 235

Query: 554  LFSSLNPEYAESWCDGLHREKIFSCYQLVKQIMVNNMSRKTPKFLPQLRVMSRMSLAXXX 375
              S ++PE AESWCDGL +EKI SCYQL+++I V+N  RK PK LPQLRV  R  +    
Sbjct: 236  KLSLVDPERAESWCDGLSKEKIISCYQLMQEITVDNNRRKPPKLLPQLRVTIRARVRSSG 295

Query: 374  XXXXXXXXXXXXXXXSCKRRRLDNYLWTDDDK 279
                             KRR+L+N LW DDDK
Sbjct: 296  SSSSSSSSSY-------KRRKLNNCLWVDDDK 320


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  424 bits (1090), Expect = e-116
 Identities = 216/340 (63%), Positives = 257/340 (75%), Gaps = 5/340 (1%)
 Frame = -3

Query: 1274 MSVSYSDCFSD-----LLCGEDSGTIFAGDDQPECSSEIESRMPPEDLEESLTRLIQHEG 1110
            MSVS S+CF D     LLCGEDS  I   D  PECSS+++S  P E   ES+   I+ E 
Sbjct: 1    MSVSCSNCFPDDDDSFLLCGEDSSGII--DSSPECSSDLDSPPPSEAEAESIAGFIEDER 58

Query: 1109 EYVPGRDYAERFQSQSLDASARAASIAWILKVQRYYGFQPLTAYLSVNYFDRVLYSRSLP 930
             +VPG +Y  RFQS+SLDASAR  S+AWILKVQ YY FQPLTAYLSVNY DR L SR LP
Sbjct: 59   NFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQLP 118

Query: 929  QTSGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTISKMEFLVLGTLDWR 750
            QT+GWP+QLLSVACLSLAAKMEE LVPSLLDLQVEGAKY+FEP+TI +ME LVLG LDWR
Sbjct: 119  QTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWR 178

Query: 749  LRSITPFSFLGFFAHKVDPTGTYTGFLISRASDIILSHIQDASFLEYWPSCIAAATILCA 570
            LRS+TPFSFL FFA K+D +GT+TGFLISRA+ IILS+IQ+ASFL YWPSCIAAA+IL A
Sbjct: 179  LRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHA 238

Query: 569  ARDLPLFSSLNPEYAESWCDGLHREKIFSCYQLVKQIMVNNMSRKTPKFLPQLRVMSRMS 390
            A ++P +S + PE+AESWC+GL +EK+  CYQL++++++NN  RK PK LPQLRV SR  
Sbjct: 239  ANEIPNWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPI 298

Query: 389  LAXXXXXXXXXXXXXXXXXXSCKRRRLDNYLWTDDDKESS 270
            +                   SCKRR+L+N LW DDDK +S
Sbjct: 299  MRSSVSSFSASSSFSPSSSLSCKRRKLNNSLWVDDDKGNS 338


>gb|AEV41133.1| D1-type cyclin [Populus x canadensis]
          Length = 327

 Score =  412 bits (1058), Expect = e-112
 Identities = 216/334 (64%), Positives = 253/334 (75%), Gaps = 1/334 (0%)
 Frame = -3

Query: 1268 VSYSDCFSDLLCGEDSGTIFAGDDQPECSSEIESRMPPEDLEESLTRLIQHEGEYVPGRD 1089
            +SYSDC SDLLCGEDS  IF+G+  PECSS++ES    E  E S+   I+ E  +VPG D
Sbjct: 1    MSYSDCLSDLLCGEDSSDIFSGES-PECSSDLESHDFVE--ESSIAGFIEDERNFVPGYD 57

Query: 1088 YAERFQSQSLDASARAASIAWILKVQRYYGFQPLTAYLSVNYFDRVLYSRSLPQTSGWPM 909
            Y  RFQSQSLDASAR  S+AWILKVQ  YGFQPLTAYLSVNY DR LYSR L QT GWP+
Sbjct: 58   YFSRFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLDRFLYSRRLQQTDGWPL 117

Query: 908  QLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTISKMEFLVLGTLDWRLRSITPF 729
            QLLSVACLSLAAKMEE LVPSLLDLQVEGAKYIFEPRTI +ME LVLG LDWRLRSITPF
Sbjct: 118  QLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPF 177

Query: 728  SFLGFFAHKVDPTGTYTGFLISRASDIILSHIQDASFLEYWPSCIAAATILCAARDLPLF 549
            SF GFFA K+DP G YTGFLISRA++IILS+I++ASFLEY PS IAAA ILCAA D+P  
Sbjct: 178  SFTGFFACKLDPAGAYTGFLISRATEIILSNIKEASFLEYRPSSIAAAAILCAANDIPNL 237

Query: 548  SSLNPEYAESWCDGLHREKIFSCYQLVKQIMVNNMSRKTPK-FLPQLRVMSRMSLAXXXX 372
            S +NPE+AESWCDGL ++KI SCY+L++ +++++  RK+ K  LP+LRV  R  +     
Sbjct: 238  SLVNPEHAESWCDGLSKDKIVSCYRLMQDLVLDDSRRKSTKVLLPRLRVTIRARMRSSGS 297

Query: 371  XXXXXXXXXXXXXXSCKRRRLDNYLWTDDDKESS 270
                            K+R+L+N LW DDDK +S
Sbjct: 298  DSSSSSSSSSY-----KKRKLNNCLWVDDDKGNS 326


>ref|XP_002312511.1| predicted protein [Populus trichocarpa] gi|159025697|emb|CAN88849.1|
            D1-type cyclin [Populus trichocarpa]
            gi|222852331|gb|EEE89878.1| predicted protein [Populus
            trichocarpa]
          Length = 328

 Score =  410 bits (1055), Expect = e-112
 Identities = 217/335 (64%), Positives = 254/335 (75%), Gaps = 2/335 (0%)
 Frame = -3

Query: 1268 VSYSDCFSDLLCGEDSGTIFAGDDQPECSSEIESRMPPEDLEESLTRLIQHEGEYVPGRD 1089
            +SYSDC SDLLCGEDS  IF+G+  PECSS++ES    E  E S+   I+ E  +VPG D
Sbjct: 1    MSYSDCLSDLLCGEDSSDIFSGES-PECSSDLESHDFVE--ESSIAGFIEDERNFVPGYD 57

Query: 1088 YAERFQSQSLDASARAASIAWILKVQRYYGFQPLTAYLSVNYFDRVLYSRSLPQTSGWPM 909
            Y  RFQSQSLDASAR  S+AWILKVQ  YGFQPLTAYLSVNY DR LYSR LPQT GWP+
Sbjct: 58   YFSRFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLDRFLYSRRLPQTDGWPL 117

Query: 908  QLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTISKMEFLVLGTLDWRLRSITPF 729
            QLLSVACLSLAAKMEE LVPSLLDLQVEGAKYIFEPRTI +ME LVLG LDWRLRSITPF
Sbjct: 118  QLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPF 177

Query: 728  SFLGFFAHKVDPTGTYTGFLISRASDIILSHIQDASFLEYWPSCIAAATILCAARDLPLF 549
            SF GFFA K+DP G YTGFLISRA++IILS+I++ASFLEY PS IAAA ILCAA D+P  
Sbjct: 178  SFTGFFACKLDPAGAYTGFLISRATEIILSNIKEASFLEYRPSSIAAAAILCAANDIPNL 237

Query: 548  SSLNPEYAESWCDGLHREKIFSCYQLVKQIMVNNMSRKTPK-FLPQLRVMSRMSLAXXXX 372
            S +NPE+AESWCDGL ++KI SCY+L++ +++++  RK+ K  LP+LRV  R  +     
Sbjct: 238  SLVNPEHAESWCDGLSKDKIISCYRLMQDLVLDDSRRKSTKVLLPRLRVTIRARMRSSGS 297

Query: 371  XXXXXXXXXXXXXXSCKRRRLDNYLW-TDDDKESS 270
                            K+R+L+N LW  DDDK +S
Sbjct: 298  DSSSSSSSSSY-----KKRKLNNCLWVVDDDKGNS 327


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  408 bits (1049), Expect = e-111
 Identities = 213/342 (62%), Positives = 258/342 (75%), Gaps = 7/342 (2%)
 Frame = -3

Query: 1274 MSVSYSDCFSD-----LLCGEDSGTIFAGDDQPECSSEIESRMPPEDLEESLTRLIQHEG 1110
            MSVS S+CF D     LLCGEDS  I   D  PECSS+++S  P E   ES+   ++ E 
Sbjct: 1    MSVSCSNCFPDDDHSFLLCGEDSSGIM--DSSPECSSDLDSSPPSE--AESIAGFMEDER 56

Query: 1109 EYVPGRDYAERFQSQSLDASARAASIAWILKVQRYYGFQPLTAYLSVNYFDRVLYSRSLP 930
             +VPG +Y  RFQS+SLDASAR  S+AWILKVQ YY FQP+TAYLSVNY DR L SR LP
Sbjct: 57   NFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPVTAYLSVNYLDRFLNSRPLP 116

Query: 929  -QTSGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTISKMEFLVLGTLDW 753
             +T+GWP+QLLSVACLSLAAKMEE+LVPSLLDLQVEGAKY+FEP+TI +ME LVLG LDW
Sbjct: 117  PKTNGWPLQLLSVACLSLAAKMEESLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDW 176

Query: 752  RLRSITPFSFLGFFAHKVDPTGTYTGFLISRASDIILSHIQDASFLEYWPSCIAAATILC 573
            RLRS+TPFSFL FFA K+D TGT+TGFLISRA+ IILS+IQ+ASFL YWPSCIAAA IL 
Sbjct: 177  RLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILH 236

Query: 572  AARDLPLFSSLNPEYAESWCDGLHREKIFSCYQLVKQIMVNNMSRKTPKFLPQLRV-MSR 396
            AA ++P +S + PE+AESWC+GL +EKI  CYQL+++++++N  RK PK LPQLRV +SR
Sbjct: 237  AANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRVTISR 296

Query: 395  MSLAXXXXXXXXXXXXXXXXXXSCKRRRLDNYLWTDDDKESS 270
              +                   SC+RR+L+N LW DDDK +S
Sbjct: 297  PIMRSSVSSFLASSSSPSSSSLSCRRRKLNNSLWVDDDKGNS 338


Top