BLASTX nr result

ID: Cephaelis21_contig00018298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018298
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16128.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]   144   1e-32
ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32

>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/170 (44%), Positives = 107/170 (62%), Gaps = 3/170 (1%)
 Frame = -3

Query: 506 ILSQILKLPPLKALSLFNAATLQGLQHTHHSISVILHQLLSSRKLYQAQALVXXXXXXXX 327
           +L +++K PPLKALSLF ++ LQG QHTH SIS ILH L+SS     +Q+L+        
Sbjct: 10  LLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQI 69

Query: 326 XXXXXXXXXXXXXXTAQPQFSSCP---LLYETVVNAYVQYQSPQKALFFINEMVNKGLLP 156
                           QP   S P   L++E ++NA+V+ Q P++ALF+ N+M+ +GL+P
Sbjct: 70  SSSSFTPSSLFHEL-TQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVP 128

Query: 155 TPNTFNNVLNFLIKVRTFDGAWSLFDGMKGKIVVDVYTFGIVIKGCCENG 6
             NTFNN+L  LIK   F+ AW +F+  KG + +DVY+FGI+IKGCCE G
Sbjct: 129 GSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVG 178


>ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  146 bits (368), Expect = 2e-33
 Identities = 79/170 (46%), Positives = 106/170 (62%), Gaps = 3/170 (1%)
 Frame = -3

Query: 506 ILSQILKLPPLKALSLFNAATLQGLQHTHHSISVILHQLLSSRKLYQAQALVXXXXXXXX 327
           ++ +++K+PP KAL LFN AT QGLQHT HSIS IL+ LLSS  L QAQ+L+        
Sbjct: 10  LIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRI 69

Query: 326 XXXXXXXXXXXXXXTAQPQFSSCPL---LYETVVNAYVQYQSPQKALFFINEMVNKGLLP 156
                           Q  F+ C     LY+TVVNAYV   S  +AL F++ M+++G +P
Sbjct: 70  PSSLMLQL-------TQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVP 122

Query: 155 TPNTFNNVLNFLIKVRTFDGAWSLFDGMKGKIVVDVYTFGIVIKGCCENG 6
             NTFNN+L  LI+   FD AW +F+ +K K+V+D Y+FGI+IKGCCE G
Sbjct: 123 LSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAG 172


>ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  144 bits (363), Expect = 7e-33
 Identities = 77/170 (45%), Positives = 106/170 (62%), Gaps = 3/170 (1%)
 Frame = -3

Query: 506 ILSQILKLPPLKALSLFNAATLQGLQHTHHSISVILHQLLSSRKLYQAQALVXXXXXXXX 327
           ++ +++K+PP KAL LFN AT QGLQHT HSIS IL+ LLSS  L QAQ+L+        
Sbjct: 10  LIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRI 69

Query: 326 XXXXXXXXXXXXXXTAQPQFSSCPL---LYETVVNAYVQYQSPQKALFFINEMVNKGLLP 156
                           Q  F+ C     LY+T+VNAYV   S  +AL F++ M+++G +P
Sbjct: 70  PSSLMLQL-------TQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVP 122

Query: 155 TPNTFNNVLNFLIKVRTFDGAWSLFDGMKGKIVVDVYTFGIVIKGCCENG 6
             NTFNN++  LI+   FD AW +F+ +K K+V+D Y+FGI+IKGCCE G
Sbjct: 123 LSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAG 172


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
 Frame = -3

Query: 494 ILKLPPLKALSLFNAATLQGLQHTHHSISVILHQLLSSRKLYQAQALVXXXXXXXXXXXX 315
           ++K PPLKALSLF ++ LQG QHTH SIS ILH L+SS     +Q+L+            
Sbjct: 1   MVKSPPLKALSLFTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSS 60

Query: 314 XXXXXXXXXXTAQPQFSSCP---LLYETVVNAYVQYQSPQKALFFINEMVNKGLLPTPNT 144
                       QP   S P   L++E ++NA+V+ Q P++ALF+ N+M+ +GL+P  NT
Sbjct: 61  FTPSSLFHEL-TQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNT 119

Query: 143 FNNVLNFLIKVRTFDGAWSLFDGMKGKIVVDVYTFGIVIKGCCENG 6
           FNN+L  LIK   F+ AW +F+  KG + +DVY+FGI+IKGCCE G
Sbjct: 120 FNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVG 165


>ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|222844663|gb|EEE82210.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/169 (43%), Positives = 106/169 (62%), Gaps = 1/169 (0%)
 Frame = -3

Query: 506 ILSQILKLPPLKALSLFNAATLQGLQHTHHSISVILHQLLSSRKLYQAQALVXXXXXXXX 327
           ++ +++K+PPL+ALSLFN++  QG QHTHHSIS +L  LL   KL  AQ+L+        
Sbjct: 9   LIQKMVKIPPLQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKI 68

Query: 326 XXXXXXXXXXXXXXTAQPQFS-SCPLLYETVVNAYVQYQSPQKALFFINEMVNKGLLPTP 150
                         T     S +  LLYE+++NA+++ Q   KAL F NEMV+KGL+  P
Sbjct: 69  SSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRP 128

Query: 149 NTFNNVLNFLIKVRTFDGAWSLFDGMKGKIVVDVYTFGIVIKGCCENGD 3
           N FN++L  L++   F+ AW  F+ +K ++  DVY+FGI+IKGCCENG+
Sbjct: 129 NIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGN 177


Top