BLASTX nr result

ID: Cephaelis21_contig00018227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018227
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...   158   6e-47
gb|AFK34889.1| unknown [Medicago truncatula]                          156   2e-46
ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...   167   3e-39
ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot...   151   2e-34
gb|ABK28336.1| unknown [Arabidopsis thaliana]                         146   9e-33

>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score =  158 bits (399), Expect(2) = 6e-47
 Identities = 81/135 (60%), Positives = 98/135 (72%)
 Frame = +3

Query: 108 MVPAVFQQAADGVGLLDSSDDTSKVEAGSKVELPFWLARDLHLRGVVFIDVPPYFKKVSR 287
           +V  +FQ+AA GVG++D S +T  +EAGSKVELPFWLA +L LR  V ++VPP F +  +
Sbjct: 16  IVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQAVSVNVPPCFNQ--K 73

Query: 288 TRKEIGADAAHVDLRNRCQYFYELGLKIAPLTGDKTIGPFLLVAFQTRYKEVLIKAHTAA 467
           TR EI AD A VDLR+RC YFYE G KIAP+ GD+TIG  LL AF+ RYKEVL KAHTAA
Sbjct: 74  TRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKNRYKEVLTKAHTAA 133

Query: 468 SVVAPRNLTFLTNEE 512
                +  T LTNEE
Sbjct: 134 IAAGSKFWTILTNEE 148



 Score = 56.6 bits (135), Expect(2) = 6e-47
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +1

Query: 601 FWSKKLNTIAVLSVQVYGAGQSSIAAFKKWRMGGPRLQRATVLGRKRKP 747
           FW+   N      + +Y   QS++A+FKKWRMGGPR Q A++LGRKRKP
Sbjct: 140 FWTILTNE----EINLYETAQSAMASFKKWRMGGPRFQIASILGRKRKP 184


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score =  156 bits (394), Expect(2) = 2e-46
 Identities = 80/135 (59%), Positives = 97/135 (71%)
 Frame = +3

Query: 108 MVPAVFQQAADGVGLLDSSDDTSKVEAGSKVELPFWLARDLHLRGVVFIDVPPYFKKVSR 287
           +V  +FQ+AA GVG++D S +T  +EAGSKVELPFWLA +L LR  V ++VPP F +  +
Sbjct: 16  IVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQAVSVNVPPCFNQ--K 73

Query: 288 TRKEIGADAAHVDLRNRCQYFYELGLKIAPLTGDKTIGPFLLVAFQTRYKEVLIKAHTAA 467
            R EI AD A VDLR+RC YFYE G KIAP+ GD+TIG  LL AF+ RYKEVL KAHTAA
Sbjct: 74  ARLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKNRYKEVLTKAHTAA 133

Query: 468 SVVAPRNLTFLTNEE 512
                +  T LTNEE
Sbjct: 134 IAAGSKFWTILTNEE 148



 Score = 56.6 bits (135), Expect(2) = 2e-46
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +1

Query: 601 FWSKKLNTIAVLSVQVYGAGQSSIAAFKKWRMGGPRLQRATVLGRKRKP 747
           FW+   N      + +Y   QS++A+FKKWRMGGPR Q A++LGRKRKP
Sbjct: 140 FWTILTNE----EINLYETAQSAMASFKKWRMGGPRFQIASILGRKRKP 184


>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  167 bits (424), Expect = 3e-39
 Identities = 93/148 (62%), Positives = 109/148 (73%)
 Frame = +3

Query: 72  FKIDEMIVYVL*MVPAVFQQAADGVGLLDSSDDTSKVEAGSKVELPFWLARDLHLRGVVF 251
           + IDE+IV    +V AVFQ+AA+GVG+LD S +T+ VE GSKVELPFWLA +L  R  V 
Sbjct: 5   YNIDEIIVEEE-LVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQAVT 63

Query: 252 IDVPPYFKKVSRTRKEIGADAAHVDLRNRCQYFYELGLKIAPLTGDKTIGPFLLVAFQTR 431
           I VP  F +  +TRKEI ADA  VDLR+RC YFYELG K+APL GD+TIG  LL AF +R
Sbjct: 64  IHVPACFNQ--KTRKEIQADAPCVDLRSRCPYFYELGCKVAPLVGDRTIGSLLLQAFLSR 121

Query: 432 YKEVLIKAHTAASVVAPRNLTFLTNEET 515
           YKEVL KAHTAAS   P+ LT LT EET
Sbjct: 122 YKEVLSKAHTAASTPVPKVLTLLTKEET 149



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 29/46 (63%), Positives = 33/46 (71%)
 Frame = +1

Query: 610 KKLNTIAVLSVQVYGAGQSSIAAFKKWRMGGPRLQRATVLGRKRKP 747
           K L  +      +Y   QSS+AAFKKWRMGGPR QRA+VLGRKRKP
Sbjct: 139 KVLTLLTKEETNLYETAQSSMAAFKKWRMGGPRFQRASVLGRKRKP 184


>ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis
           sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA
           replication complex GINS protein PSF3-like [Cucumis
           sativus]
          Length = 189

 Score =  151 bits (382), Expect = 2e-34
 Identities = 79/137 (57%), Positives = 100/137 (72%)
 Frame = +3

Query: 108 MVPAVFQQAADGVGLLDSSDDTSKVEAGSKVELPFWLARDLHLRGVVFIDVPPYFKKVSR 287
           +V  VFQ+A +GVG+ D S +T  VE+GSKVELPFWLA++LHLR V  + +P  F +  R
Sbjct: 20  LVSVVFQKAVNGVGI-DPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQ--R 76

Query: 288 TRKEIGADAAHVDLRNRCQYFYELGLKIAPLTGDKTIGPFLLVAFQTRYKEVLIKAHTAA 467
           TR EI ADAA VDLR+RCQ+FYE G KIAPL GD+TIG +LL   ++RYKEVL KAH+A 
Sbjct: 77  TRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTLKSRYKEVLTKAHSAV 136

Query: 468 SVVAPRNLTFLTNEETK 518
              + + L  L+ EETK
Sbjct: 137 FAASSKYLALLSKEETK 153



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%)
 Frame = +1

Query: 595 FGFWSKKLNTIAVLSVQVYGAGQSSIAAFKKWRMGGPRLQRATVLGRKRK 744
           F   SK L  ++    ++Y A QSS+ AFKKWRMGGPR QRA+ L RKRK
Sbjct: 137 FAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRK 186


>gb|ABK28336.1| unknown [Arabidopsis thaliana]
          Length = 186

 Score =  146 bits (368), Expect = 9e-33
 Identities = 78/148 (52%), Positives = 103/148 (69%)
 Frame = +3

Query: 72  FKIDEMIVYVL*MVPAVFQQAADGVGLLDSSDDTSKVEAGSKVELPFWLARDLHLRGVVF 251
           F ID++++     VP +F + A+GV  +D S +T+  E GSKVELPFWLA +LHLR  V 
Sbjct: 5   FDIDDILIEEE-FVPVLFHKTANGV-TIDPSAETNCAEQGSKVELPFWLAHELHLRQAVT 62

Query: 252 IDVPPYFKKVSRTRKEIGADAAHVDLRNRCQYFYELGLKIAPLTGDKTIGPFLLVAFQTR 431
           I++PP F +  +TR E+ ADAA+VDLR+RC YFYE G KI PL  D+T+G  L  AF+ R
Sbjct: 63  INLPPCFDQ--KTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 432 YKEVLIKAHTAASVVAPRNLTFLTNEET 515
           YKE L K +TAA + A + L+FLT EET
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEET 148


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